RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 GPC5P78333 572 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 DSG1Q02413 1049 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 BST2Q10589 180 aaKnown RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 CTXN3Q4LDR2 81 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 ARHGAP29Q52LW3 1261 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 C2CD6Q53TS8 623 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 PPP1R15BQ5SWA1 713 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 SPOUT1Q5T280 376 aaKnown RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 PLEKHA7Q6IQ23 1121 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 SLC8B1Q6J4K2 584 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 ZNF280DQ6N043 979 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 PMF1Q6P1K2 205 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 PRSS55Q6UWB4 352 aaPredicted RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 CLEC20AQ6ZU45 233 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 ANKS3Q6ZW76 656 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 TMEM110Q86TL2 294 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 DDX53Q86TM3 631 aaKnown RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 CEP57Q86XR8 500 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 THEM5Q8N1Q8 247 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 TXLNBQ8N3L3 684 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 RFFLQ8WZ73 363 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 ZNF653Q96CK0 615 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 MCRS1Q96EZ8 462 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 SMOQ99835 787 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 DUSP16Q9BY84 665 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 RHOBTB2Q9BYZ6 727 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 PDCL3Q9H2J4 239 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 OSGEPQ9NPF4 335 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 RRAGDQ9NQL2 400 aaPredicted RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 SPG21Q9NZD8 308 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 ADAM22Q9P0K1 906 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 CNOT8Q9UFF9 292 aaKnown RBP8.72□□□□□ -1.01
USP4-210ENST00000483212 CEP83Q9Y592 693 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 PAXBP1Q9Y5B6 917 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 BACE2Q9Y5Z0 518 aa8.72□□□□□ -1.01
USP4-210ENST00000483212 GRID2IPA4D2P6 1211 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 HHLA1C9JL84 531 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 E5RJQ4 531 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 C5orf67F2Z3F1 127 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 XPO1O14980 1071 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 ADAM12O43184 909 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 KRT86O43790 486 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 TLL1O43897 1013 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 LILRB3O75022 631 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 FGF18O76093 207 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 MOCS3O95396 460 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 CALB1P05937 261 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 MYOGP15173 224 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 GLUD2P49448 558 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 TSPY1Q01534 308 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 MAPRE1Q15691 268 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 USP41Q3LFD5 358 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 CFAP221Q4G0U5 840 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 SPRED2Q7Z698 418 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 XYLT1Q86Y38 959 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 GPR65Q8IYL9 337 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 RNF10Q8N5U6 811 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 LRRC57Q8N9N7 239 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 SLC35G2Q8TBE7 412 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 CTNNBL1Q8WYA6 563 aaPredicted RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 KCTD13Q8WZ19 329 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 TRIM11Q96F44 468 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 TMEM169Q96HH4 297 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 HSFY1Q96LI6 401 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 C16orf45Q96MC5 204 aaPredicted RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 ZBED2Q9BTP6 218 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 OXCT2Q9BYC2 517 aaPredicted RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 UBXN6Q9BZV1 441 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 DNAI2Q9GZS0 605 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 ZBP1Q9H171 429 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 CYLDQ9NQC7 956 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 KRT82Q9NSB4 513 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 MYO1AQ9UBC5 1043 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 HESX1Q9UBX0 185 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 CHORDC1Q9UHD1 332 aaPredicted RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 PCDHGC5Q9Y5F6 944 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 PTPRDP23468 1912 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 LAMA2P24043 3122 aaKnown RBP8.71□□□□□ -1.02
USP4-210ENST00000483212 CHD9Q3L8U1 2897 aa8.71□□□□□ -1.02
USP4-210ENST00000483212 PATJQ8NI35 1801 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 MACROD2A1Z1Q3 448 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 MTMR11A4FU01 709 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 H0YGN5 161 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 H7C4K7 107 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 PAPSS1O43252 624 aaPredicted RBP8.7□□□□□ -1.02
USP4-210ENST00000483212 BUB1O43683 1085 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 AP1G2O75843 785 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 GJB6O95452 261 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 FAM200BP0CF97 657 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 BDNFP23560 247 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 BMPR1AP36894 532 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 MAGEA11P43364 429 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 RGS19P49795 217 aa8.7□□□□□ -1.02
USP4-210ENST00000483212 RGS7P49802 495 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms