RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 FAM71AQ8IYT1 594 aa21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 FUBP3Q96I24 572 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 KRT82Q9NSB4 513 aa21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 YIPF1Q9Y548 306 aa21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 MYH10P35580 1976 aa21.13■□□□□ 0.97
TRAPPC12-220ENST00000482645 AP1G2O75843 785 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 LRG1P02750 347 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 SOX5P35711 763 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 GRIK1P39086 918 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 GPR15P49685 360 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 PTK2Q05397 1052 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 TWF1Q12792 350 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 CLUL1Q15846 466 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 ASIC2Q16515 512 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 DDR2Q16832 855 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 TSR1Q2NL82 804 aaKnown RBP21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 GOLGA7BQ2TAP0 167 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 SDHAF4Q5VUM1 108 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 PAQR9Q6ZVX9 377 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 SLC47A2Q86VL8 602 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 OR8K1Q8NGG5 319 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 GPR152Q8TDT2 470 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 TFAP2BQ92481 460 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 NUCKS1Q9H1E3 243 aaKnown RBP21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 ABCB6Q9NP58 842 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 DZANK1Q9NVP4 752 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 MYO6Q9UM54 1294 aa21.12■□□□□ 0.97
TRAPPC12-220ENST00000482645 PTPRDP23468 1912 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 BRWD1Q9NSI6 2320 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 CCL16O15467 120 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 ZMYND10O75800 440 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 C1RP00736 705 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 HAPLN1P10915 354 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 CLCN1P35523 988 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 ALDH1A3P47895 512 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 TUFMP49411 452 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 CACNA2D1P54289 1103 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 CTC1Q2NKJ3 1217 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 RARS2Q5T160 578 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 TMC5Q6UXY8 1006 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 STKLD1Q8NE28 680 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 SMARCD1Q96GM5 515 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 PANX2Q96RD6 677 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 HNRNPABQ99729 332 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 SFXN1Q9H9B4 322 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 TSPAN16Q9UKR8 245 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 MAFFQ9ULX9 164 aa21.11■□□□□ 0.97
TRAPPC12-220ENST00000482645 CCDC195A0A1B0GUA6 201 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 FAM200BP0CF97 657 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 PDE6CP51160 858 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 ANKRD54Q6NXT1 300 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 TMEM184AQ6ZMB5 413 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 GIPC2Q8TF65 315 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 HDAC7Q8WUI4 952 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 ZSWIM1Q9BR11 485 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 ZNHIT6Q9NWK9 470 aaKnown RBP21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 CLEC1BQ9P126 229 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 KIAA1257Q9ULG3 409 aa21.1■□□□□ 0.97
TRAPPC12-220ENST00000482645 F8VP50 259 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 H3BQ06 376 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 O00370 1275 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 ATF6P18850 670 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 KCNA5P22460 613 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 ANXA13P27216 316 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 LTBRP36941 435 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 MAP3K7CLP57077 242 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 ARHGAP17Q68EM7 881 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 VSTM1Q6UX27 236 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 FEZF2Q8TBJ5 459 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 KCNK16Q96T55 309 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 UBE2ZQ9H832 354 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 TMEM30AQ9NV96 361 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 HSFX1Q9UBD0 423 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 HESX1Q9UBX0 185 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 M0QYV0 167 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 FERP16591 822 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 MAGEA11P43364 429 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 EPHB3P54753 998 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 BPIFB4P59827 614 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 RPL10AP62906 217 aaKnown RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 TDRD12Q587J7 1177 aaKnown RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 TAF3Q5VWG9 929 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 UBA3Q8TBC4 463 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 ZNF606Q8WXB4 792 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 SYN2Q92777 582 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 PIDD1Q9HB75 910 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 DMAP1Q9NPF5 467 aaPredicted RBP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 ZDHHC7Q9NXF8 308 aa21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.09■□□□□ 0.97
TRAPPC12-220ENST00000482645 TRIM66O15016 1216 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 MED7O43513 233 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 BEST1O76090 585 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 MICAL2O94851 1124 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 CYP11B1P15538 503 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 NPR3P17342 541 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 PLD1Q13393 1074 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 COL19A1Q14993 1142 aa21.08■□□□□ 0.96
TRAPPC12-220ENST00000482645 VEPH1Q14D04 833 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms