RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TACC1O75410 805 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 USP17L7P0C7H9 530 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 SLFN14P0C7P3 912 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 ANXA13P27216 316 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 PSMC1P62191 440 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 TNNC1P63316 161 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 SATB1Q01826 763 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 CYP27A1Q02318 531 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 FAM160A1Q05DH4 1040 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 PSMD2Q13200 908 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 BMT2Q1RMZ1 405 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 WDR72Q3MJ13 1102 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 OR6B3Q8NGW1 331 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 GOLGA5Q8TBA6 731 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 ZNF516Q92618 1163 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 MYLPFQ96A32 169 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 EXOC4Q96A65 974 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 SPATA17Q96L03 361 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 EBF3Q9H4W6 596 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 TRPC7Q9HCX4 862 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 CRTAC1Q9NQ79 661 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 RBM12Q9NTZ6 932 aaKnown RBP14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 CCL26Q9Y258 94 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 DCHS1Q96JQ0 3298 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 TRIM66O15016 1216 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 PHACTR2O75167 634 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 TDGF1P13385 188 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 BDNFP23560 247 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 HOXC13P31276 330 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 ATICP31939 592 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 CNR2P34972 360 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 PDE6CP51160 858 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 AP3M2P53677 418 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 GRSF1Q12849 480 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 CCINQ13939 588 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 GAS6Q14393 721 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 PDGFRLQ15198 375 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 DENND5BQ6ZUT9 1274 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 MYCBPAPQ8TBZ2 947 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 ELMO3Q96BJ8 720 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 CYP2S1Q96SQ9 504 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 USP25Q9UHP3 1055 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 GMEB2Q9UKD1 530 aa14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 ZNF638Q14966 1978 aaKnown RBP14.36□□□□□ -0.11
CTDSP1-208ENST00000482272 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 FRYLO94915 3013 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 TRDMT1O14717 391 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 ATG13O75143 517 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 PAPSS2O95340 614 aaPredicted RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 STAU1O95793 577 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 MYL1P05976 194 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 CKMP06732 381 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 HDCP19113 662 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 CMA1P23946 247 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 PPP3CCP48454 512 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 CASP4P49662 377 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 STK4Q13043 487 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 MTF1Q14872 753 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 TRIM68Q6AZZ1 485 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 LONP2Q86WA8 852 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 PAGE5Q96GU1 130 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 PCED1BQ96HM7 432 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 MRPL45Q9BRJ2 306 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 HPS4Q9NQG7 708 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 DUS2Q9NX74 493 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
CTDSP1-208ENST00000482272 PTPRZ1P23471 2315 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 A8MXQ7 604 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 PFKFB1P16118 471 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 PFKLP17858 780 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 PTPN1P18031 435 aaKnown RBP14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 IFNAR2P48551 515 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 GALK1P51570 392 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 MYL6P60660 151 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 KRT85P78386 507 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 NR1H3Q13133 447 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 BIRC3Q13489 604 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 PUM1Q14671 1186 aaKnown RBP eCLIP14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 KCNB1Q14721 858 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 KMT5BQ4FZB7 885 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 TMEM196Q5HYL7 178 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 Q6ZS52 159 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 CPA6Q8N4T0 437 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 ARL14EPQ8N8R7 260 aaPredicted RBP14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 OSCP1Q8WVF1 389 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 RMDN1Q96DB5 314 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 C8orf48Q96LL4 319 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 EXOC1Q9NV70 894 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 TMEM30AQ9NV96 361 aa14.34□□□□□ -0.11
CTDSP1-208ENST00000482272 C2orf42Q9NWW7 574 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms