RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 NOMO2Q5JPE7 1267 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 MLH1P40692 756 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 EPHB3P54753 998 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 FBXO38Q6PIJ6 1188 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 C18orf25Q96B23 403 aaPredicted RBP20.16■□□□□ 0.82
CCM2-214ENST00000481194 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 M0QYT0 321 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 ZNF185O15231 689 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 KRT38O76015 456 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 PIGRP01833 764 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 SLC11A2P49281 568 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 ZNF135P52742 658 aaPredicted RBP20.16■□□□□ 0.82
CCM2-214ENST00000481194 GNGT1P63211 74 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 CNGA2Q16280 664 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 SENP8Q96LD8 212 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 WDCPQ9H6R7 721 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 AMACRQ9UHK6 382 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 CDH9Q9ULB4 789 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 USP20Q9Y2K6 914 aa20.16■□□□□ 0.82
CCM2-214ENST00000481194 KCNN4O15554 427 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 B4GALT5O43286 388 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 PBX1P40424 430 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
CCM2-214ENST00000481194 RAPH1Q70E73 1250 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 PACSIN1Q9BY11 444 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 PCDHB8Q9UN66 801 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 DDX3XO00571 662 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCM2-214ENST00000481194 OPLAHO14841 1288 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 ORC1Q13415 861 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 MAP7D1Q3KQU3 841 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 EEF1DP3Q658K8 133 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 NOP9Q86U38 636 aaKnown RBP20.15■□□□□ 0.82
CCM2-214ENST00000481194 LRRC8CQ8TDW0 803 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 PRDM10Q9NQV6 1147 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 KLHL11Q9NVR0 708 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 PLAAQ9Y263 795 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 INHAP05111 366 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 MAP3K7CLP57077 242 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 RAB3IL1Q8TBN0 382 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 MGARPQ8TDB4 240 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 INTS9Q9NV88 658 aaKnown RBP20.15■□□□□ 0.82
CCM2-214ENST00000481194 TSPAN1O60635 241 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 ATG7O95352 703 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 TNFSF9P41273 254 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 GHRHRQ02643 423 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 FAM43BQ6ZT52 329 aaPredicted RBP20.15■□□□□ 0.82
CCM2-214ENST00000481194 EPS8L1Q8TE68 723 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 DDIT4Q9NX09 232 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 TRPM5Q9NZQ8 1165 aa20.15■□□□□ 0.82
CCM2-214ENST00000481194 ASS1P00966 412 aaKnown RBP20.14■□□□□ 0.82
CCM2-214ENST00000481194 PAPOLAP51003 745 aaKnown RBP20.14■□□□□ 0.82
CCM2-214ENST00000481194 DCLRE1AQ6PJP8 1040 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 MS4A14Q96JA4 679 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 PDZD7Q9H5P4 517 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 XPNPEP1Q9NQW7 623 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 ENTPD7Q9NQZ7 604 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.14■□□□□ 0.82
CCM2-214ENST00000481194 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.14■□□□□ 0.82
CCM2-214ENST00000481194 IPPQ9Y573 584 aa20.14■□□□□ 0.82
CCM2-214ENST00000481194 CD52P31358 61 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 SCNN1GP51170 649 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 PID1Q7Z2X4 250 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 ZC3H18Q86VM9 953 aaKnown RBP20.14■□□□□ 0.81
CCM2-214ENST00000481194 DEFB118Q96PH6 123 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCM2-214ENST00000481194 TPX2Q9ULW0 747 aaKnown RBP20.14■□□□□ 0.81
CCM2-214ENST00000481194 STIP1P31948 543 aaKnown RBP20.14■□□□□ 0.81
CCM2-214ENST00000481194 TKTL1P51854 596 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 BAP1Q92560 729 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 VPS39Q96JC1 886 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 NUDCD1Q96RS6 583 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 TLR8Q9NR97 1041 aaKnown RBP20.14■□□□□ 0.81
CCM2-214ENST00000481194 TFDP3Q5H9I0 405 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 C3orf20Q8ND61 904 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 NFKBIZQ9BYH8 718 aa20.14■□□□□ 0.81
CCM2-214ENST00000481194 RSPH1Q8WYR4 309 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 EMILIN2Q9BXX0 1053 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 CST8O60676 142 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 EDNRBP24530 442 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 TRMT10CQ7L0Y3 403 aaKnown RBP20.13■□□□□ 0.81
CCM2-214ENST00000481194 SLFN11Q7Z7L1 901 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 FBF1Q8TES7 1133 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 FAM172AQ8WUF8 416 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 SHISA4Q96DD7 197 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 LRRC1Q9BTT6 524 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 L2HGDHQ9H9P8 463 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 STK39Q9UEW8 545 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 ATP2C2O75185 946 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 CACNB2Q08289 660 aaPredicted RBP20.13■□□□□ 0.81
CCM2-214ENST00000481194 PHLDB3Q6NSJ2 640 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 MRPS31Q92665 395 aaKnown RBP20.13■□□□□ 0.81
CCM2-214ENST00000481194 SPON2Q9BUD6 331 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 OXCT2Q9BYC2 517 aaPredicted RBP20.13■□□□□ 0.81
CCM2-214ENST00000481194 DMAC2Q9NW81 257 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 SF3B1O75533 1304 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCM2-214ENST00000481194 PMM2O15305 246 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 HIF1AQ16665 826 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 MAMDC4Q6UXC1 1216 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 SAPCD2Q86UD0 394 aa20.13■□□□□ 0.81
CCM2-214ENST00000481194 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms