RNA–Protein interactions for RNA: ENST00000480828.5

UBE2F-221, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 802 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-221ENST00000480828 RTKNQ9BST9 563 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 DDX23Q9BUQ8 820 aaKnown RBP4.17□□□□□ -1.74
UBE2F-221ENST00000480828 CARD11Q9BXL7 1154 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 CPEB1Q9BZB8 566 aaKnown RBP4.17□□□□□ -1.74
UBE2F-221ENST00000480828 IMPG2Q9BZV3 1241 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 SLC6A15Q9H2J7 730 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 L2HGDHQ9H9P8 463 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 SEPSECSQ9HD40 501 aaKnown RBP4.17□□□□□ -1.74
UBE2F-221ENST00000480828 IRAK4Q9NWZ3 460 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 AASSQ9UDR5 926 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 DAPP1Q9UN19 280 aa4.17□□□□□ -1.74
UBE2F-221ENST00000480828 H0Y3Z8 333 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CCER2I3L3R5 266 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 RRP9O43818 475 aaKnown RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 PLATP00750 562 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 SNRPA1P09661 255 aaKnown RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TPH1P17752 444 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CHRM3P20309 590 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 FDXRP22570 491 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CSF2RBP32927 897 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 BCAT1P54687 386 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 NUCB1Q02818 461 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TLE2Q04725 743 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 UBE3AQ05086 875 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 SCAPQ12770 1279 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 MRPL49Q13405 166 aaKnown RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 BOP1Q14137 746 aaKnown RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 ARHGEF7Q14155 803 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 SLC5A9Q2M3M2 681 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 FAXCQ5TGI0 409 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CACHD1Q5VU97 1274 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 FAM160B1Q5W0V3 765 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 USP17L6PQ6QN14 398 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 C4orf50Q6ZRC1 276 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 PPP1R32Q7Z5V6 425 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 ADGRE4PQ86SQ3 457 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 ZNF280BQ86YH2 543 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CMTM4Q8IZR5 234 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 AOPEPQ8N6M6 819 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TXNDC5Q8NBS9 432 aaKnown RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 RNF169Q8NCN4 708 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 PDPRQ8NCN5 879 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 DNERQ8NFT8 737 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 NLGN4YQ8NFZ3 816 aaPredicted RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 CEP70Q8NHQ1 597 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TBC1D15Q8TC07 691 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 HVCN1Q96D96 273 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TRAPPC9Q96Q05 1148 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 PPP1R9BQ96SB3 815 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 C1QTNF3Q9BXJ4 246 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 AGXT2Q9BYV1 514 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TTYH3Q9C0H2 523 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TP63Q9H3D4 680 aaPredicted RBP4.16□□□□□ -1.74
UBE2F-221ENST00000480828 NELFAQ9H3P2 528 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 PLEKHA5Q9HAU0 1116 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 IL23AQ9NPF7 189 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 JADE2Q9NQC1 790 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 TMEM160Q9NX00 188 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 HESX1Q9UBX0 185 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 ASAP1Q9ULH1 1129 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 ARHGAP26Q9UNA1 814 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 DTNAQ9Y4J8 743 aa4.16□□□□□ -1.74
UBE2F-221ENST00000480828 A0A0U1RQG5 324 aaPredicted RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 A0A1W2PPH5 198 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 DCLK1O15075 740 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 B4GALT3O60512 393 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 KRT38O76015 456 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 INMTO95050 263 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ANXA1P04083 346 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 TK1P04183 234 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ITGB1P05556 798 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 SRGAP2BP0DMP2 458 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 INSRRP14616 1297 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 TNFRSF1AP19438 455 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 AKT1P31749 480 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ALDH18A1P54886 795 aaKnown RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 NPEPPSP55786 919 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 CLRN1P58418 232 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ACTR2P61160 394 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 NSUN2Q08J23 767 aaKnown RBP eCLIP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 FSTL1Q12841 308 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 PRKG2Q13237 762 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 USP10Q14694 798 aaKnown RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 UBXN2BQ14CS0 331 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ZIK1Q3SY52 487 aaPredicted RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 GAGE13Q4V321 117 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 AMOTQ4VCS5 1084 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 SLC9C2Q5TAH2 1124 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 MCTP2Q6DN12 878 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ITPRIPL1Q6GPH6 555 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 USP30Q70CQ3 517 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 FASTKD5Q7L8L6 764 aaKnown RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 REXO1L1PQ8IX06 675 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 TCP11L2Q8N4U5 519 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ANKRD52Q8NB46 1076 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 CENPIQ92674 756 aaPredicted RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 GOLGA1Q92805 767 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 DDX17Q92841 729 aaKnown RBP4.15□□□□□ -1.75
UBE2F-221ENST00000480828 LPPQ93052 612 aa4.15□□□□□ -1.75
UBE2F-221ENST00000480828 ZUFSPQ96AP4 578 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms