RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 FARP1Q9Y4F1 1045 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 DOT1LQ8TEK3 1739 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 IGKV6D-41A0A0C4DH26 115 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 SLITRK3O94933 977 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 CDH2P19022 906 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 PCSK6P29122 969 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 PMLP29590 882 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 MTTPP55157 894 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 DLG4P78352 724 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 WASHC5Q12768 1159 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 EFTUD2Q15029 972 aaKnown RBP eCLIP11.13□□□□□ -0.63
SIK3-210ENST00000480468 PRR16Q569H4 304 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 HP1BP3Q5SSJ5 553 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 MCOLN2Q8IZK6 566 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 CCDC33Q8N5R6 958 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 MARCH10Q8NA82 808 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 DQX1Q8TE96 717 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 UIMC1Q96RL1 719 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 EIF2AK1Q9BQI3 630 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 GRIP2Q9C0E4 1043 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 UBAP1Q9NZ09 502 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 TFCP2L1Q9NZI6 479 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 DNPEPQ9ULA0 475 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 CEPT1Q9Y6K0 416 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 SF3B1O75533 1304 aaKnown RBP eCLIP11.13□□□□□ -0.63
SIK3-210ENST00000480468 ARHGAP42A6NI28 874 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 PRR5-ARHGAP8B1AHC4 643 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 GOLGA8RI6L899 631 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 MAGEB3O15480 346 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 UNGP13051 313 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 RAG1P15918 1043 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 CIITAP33076 1130 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 MXI1P50539 228 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 HIRAP54198 1017 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 ARHGAP8P85298 464 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ZNF200P98182 395 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 CCDC80Q76M96 950 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 KBTBD6Q86V97 674 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 CATSPER1Q8NEC5 780 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 TRPC4APQ8TEL6 797 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 NKD2Q969F2 451 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 FAM118BQ9BPY3 351 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ADAM33Q9BZ11 813 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 STN1Q9H668 368 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 SDR42E2A6NKP2 422 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 H3BNX3 289 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 STK10O94804 968 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 KLHL2O95198 593 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ITGAVP06756 1048 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ZSCAN5DPP0CG00 497 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 SSTR1P30872 391 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 PTPN7P35236 360 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 GCLMP48507 274 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 HSPA13P48723 471 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ERFP50548 548 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 VCPP55072 806 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 COG7P83436 770 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 CYP4A11Q02928 519 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 OASLQ15646 514 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 GRAMD1BQ3KR37 738 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 SYCP2LQ5T4T6 812 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 USP17L6PQ6QN14 398 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ANKMY2Q8IV38 441 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 ARID3BQ8IVW6 561 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 RCOR2Q8IZ40 523 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 APBB2Q92870 758 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 HSPBAP1Q96EW2 488 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 DCUN1D1Q96GG9 259 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 KLF6Q99612 283 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 HSD17B14Q9BPX1 270 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 RTFDC1Q9BY42 306 aaPredicted RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
SIK3-210ENST00000480468 TMEM117Q9H0C3 514 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 MKS1Q9NXB0 559 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 PSMD13Q9UNM6 376 aa11.12□□□□□ -0.63
SIK3-210ENST00000480468 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms