RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 C2CD2LO14523 706 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 BUB1O43683 1085 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 AP1G2O75843 785 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 MOCS3O95396 460 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 FAM200BP0CF97 657 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 NPR3P17342 541 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 BDNFP23560 247 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RRM1P23921 792 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 NOP2P46087 812 aaKnown RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 GLUD2P49448 558 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RGS7P49802 495 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 NAP1L1P55209 391 aaKnown RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 ARPP19P56211 112 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 SLC8A3P57103 927 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 DSG1Q02413 1049 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 PSMD5Q16401 504 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RSPO2Q6UXX9 243 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 CLEC20AQ6ZU45 233 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 NYAP1Q6ZVC0 841 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 VPS52Q8N1B4 723 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RNF10Q8N5U6 811 aaKnown RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 STK32AQ8WU08 396 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RFFLQ8WZ73 363 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 C18orf8Q96DM3 657 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 C16orf45Q96MC5 204 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 SMOQ99835 787 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 SLC4A5Q9BY07 1137 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 RHOBTB2Q9BYZ6 727 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 SYNCQ9H7C4 482 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 ST7Q9NRC1 585 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 KRT82Q9NSB4 513 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 MTRRQ9UBK8 725 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 TJP2Q9UDY2 1190 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 CHORDC1Q9UHD1 332 aaPredicted RBP18.57■□□□□ 0.56
UPF3A-206ENST00000480362 BACE2Q9Y5Z0 518 aa18.57■□□□□ 0.56
UPF3A-206ENST00000480362 XPO1O14980 1071 aaKnown RBP18.56■□□□□ 0.56
UPF3A-206ENST00000480362 KIF5CO60282 957 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 BEST1O76090 585 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 ERBB2P04626 1255 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 CTNNB1P35222 781 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 GABRB2P47870 512 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 MAP3K7CLP57077 242 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 NFE2Q16621 373 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-206ENST00000480362 CYP4A22Q5TCH4 519 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 LLGL2Q6P1M3 1020 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 RHOT2Q8IXI1 618 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 FBXO22Q8NEZ5 403 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 SMARCD1Q96GM5 515 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 AVENQ9NQS1 362 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-206ENST00000480362 CTTNBP2NLQ9P2B4 639 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 STK39Q9UEW8 545 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
UPF3A-206ENST00000480362 PIK3R2O00459 728 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 GABBR2O75899 941 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 ARHGEF15O94989 841 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 URODP06132 367 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 CPB1P15086 417 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 RPL17P18621 184 aaKnown RBP18.55■□□□□ 0.56
UPF3A-206ENST00000480362 PLA2G4AP47712 749 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 CACNA2D1P54289 1103 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 GNG11P61952 73 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 GPR17Q13304 367 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 ZNF268Q14587 947 aaPredicted RBP18.55■□□□□ 0.56
UPF3A-206ENST00000480362 TCEAL1Q15170 157 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 ZNF569Q5MCW4 686 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 TMEM110Q86TL2 294 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 PIGZQ86VD9 579 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 IPO4Q8TEX9 1081 aaKnown RBP18.55■□□□□ 0.56
UPF3A-206ENST00000480362 KCNK16Q96T55 309 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 C17orf80Q9BSJ5 609 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 NUP85Q9BW27 656 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 OSGEPQ9NPF4 335 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 TMEM30AQ9NV96 361 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 ABI2Q9NYB9 513 aaPredicted RBP18.55■□□□□ 0.56
UPF3A-206ENST00000480362 STRIP2Q9ULQ0 834 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 COG5Q9UP83 839 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 PCDHB5Q9Y5E4 795 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 CDY1Q9Y6F8 540 aa18.55■□□□□ 0.56
UPF3A-206ENST00000480362 E5RJQ4 531 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 ADAM12O43184 909 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 CAPN15O75808 1086 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 CA3P07451 260 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 CYP2F1P24903 491 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 OR1D2P34982 312 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 RPL34P49207 117 aaKnown RBP18.54■□□□□ 0.56
UPF3A-206ENST00000480362 SNX16P57768 344 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 IFI16Q16666 785 aaKnown RBP18.54■□□□□ 0.56
UPF3A-206ENST00000480362 PLEKHA7Q6IQ23 1121 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 SLC8B1Q6J4K2 584 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 RNF19BQ6ZMZ0 732 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 XYLT1Q86Y38 959 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 ZMIZ2Q8NF64 920 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 AUTS2Q8WXX7 1259 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 HSFY1Q96LI6 401 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 PGLYRP2Q96PD5 576 aa18.54■□□□□ 0.56
UPF3A-206ENST00000480362 CLSTN3Q9BQT9 956 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms