RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 OSBPL6Q9BZF3 934 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 IMPG2Q9BZV3 1241 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 HSD3B7Q9H2F3 369 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 NDST4Q9H3R1 872 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 SMYD3Q9H7B4 428 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 APOBEC3GQ9HC16 384 aaKnown RBP9.68□□□□□ -0.86
VCP-206ENST00000480327 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
VCP-206ENST00000480327 SPATA6Q9NWH7 488 aaPredicted RBP9.68□□□□□ -0.86
VCP-206ENST00000480327 RAB20Q9NX57 234 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 GDAP2Q9NXN4 497 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 LAMA1P25391 3075 aa9.68□□□□□ -0.86
VCP-206ENST00000480327 GOLGA6L19H0YKK7 550 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 H7C4K7 107 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 XYLBO75191 536 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ECI2O75521 394 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ASS1P00966 412 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 PDGFRBP09619 1106 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 OR4Q2P0C623 313 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ZNF18P17022 549 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 TYMPP19971 482 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ACAT1P24752 427 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 COPB1P53618 953 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 CDH8P55286 799 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ZNF445P59923 1031 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 NOP14P78316 857 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 APBA1Q02410 837 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 CSTF1Q05048 431 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 CETN1Q12798 172 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 MRPL58Q14197 206 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 PDXDC1Q6P996 788 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 TPRG1Q6ZUI0 275 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ANKS3Q6ZW76 656 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 OSTM1Q86WC4 334 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ADGRF2Q8IZF7 708 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 ANKRD20A12PQ8NF67 263 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 FAM200AQ8TCP9 573 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 TAF4BQ92750 862 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 SHDQ96IW2 340 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 TMEM209Q96SK2 561 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 INTS2Q9H0H0 1204 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 SDCBP2Q9H190 292 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 PRMT8Q9NR22 394 aaPredicted RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 HEBP1Q9NRV9 189 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 GCNT4Q9P109 453 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 FBXL5Q9UKA1 691 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 FBXO4Q9UKT5 387 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 MRPS23Q9Y3D9 190 aaKnown RBP9.67□□□□□ -0.86
VCP-206ENST00000480327 MYO16Q9Y6X6 1858 aa9.67□□□□□ -0.86
VCP-206ENST00000480327 KIAA1549LQ6ZVL6 1849 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 P4HA2O15460 535 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 LAMTOR5O43504 91 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 OAZ2O95190 189 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 VNN2O95498 520 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 STAU1O95793 577 aaKnown RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 CAVIN2O95810 425 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 CYP11A1P05108 521 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 TPM2P07951 284 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 P4HA1P13674 534 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 CD58P19256 250 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 SLC9A1P19634 815 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 PAX3P23760 479 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 LMO2P25791 158 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ASPAP45381 313 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 TPM4P67936 248 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ORC1Q13415 861 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 RSPO4Q2I0M5 234 aaPredicted RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 FAM78AQ5JUQ0 283 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ZNF280DQ6N043 979 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ZC3H14Q6PJT7 736 aaKnown RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 GBP6Q6ZN66 633 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 RTL10Q7L3V2 364 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 DGLUCYQ7Z3D6 616 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ARHGEF19Q8IW93 802 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 THEM5Q8N1Q8 247 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 TOP6BLQ8N6T0 577 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 OR6B3Q8NGW1 331 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 OR10T2Q8NGX3 314 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ZNF461Q8TAF7 563 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 LMO3Q8TAP4 145 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 KBTBD7Q8WVZ9 684 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ELSPBP1Q96BH3 223 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ZSWIM3Q96MP5 696 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ARID3AQ99856 593 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 LPIN3Q9BQK8 851 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 BCO2Q9BYV7 579 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 NIF3L1Q9GZT8 377 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 SNX25Q9H3E2 840 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 VRTNQ9H8Y1 702 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 PARD6AQ9NPB6 346 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 DDX43Q9NXZ2 648 aaKnown RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 LIMA1Q9UHB6 759 aaKnown RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 DSEQ9UL01 958 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 COQ4Q9Y3A0 265 aa9.66□□□□□ -0.86
VCP-206ENST00000480327 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
VCP-206ENST00000480327 ATG2BQ96BY7 2078 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 TPRP12270 2363 aaKnown RBP9.65□□□□□ -0.86
VCP-206ENST00000480327 CACNA1BQ00975 2339 aa9.65□□□□□ -0.86
VCP-206ENST00000480327 ZFHX4Q86UP3 3567 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms