RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 KRT17Q04695 432 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 PTPN14Q15678 1187 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 PSMD5Q16401 504 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 PTPN20Q4JDL3 420 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 KIAA1841Q6NSI8 718 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 ZDHHC17Q8IUH5 632 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 WDTC1Q8N5D0 677 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 TRIM58Q8NG06 486 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 C2orf15Q8WU43 125 aaKnown RBP13.3□□□□□ -0.28
SIK3-209ENST00000480222 SLC35F5Q8WV83 523 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 HSFY1Q96LI6 401 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 C16orf45Q96MC5 204 aaPredicted RBP13.3□□□□□ -0.28
SIK3-209ENST00000480222 MED10Q9BTT4 135 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 VN1R3Q9BXE9 311 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 B3GNT5Q9BYG0 378 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 SYNCQ9H7C4 482 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 MRPL47Q9HD33 250 aaKnown RBP13.3□□□□□ -0.28
SIK3-209ENST00000480222 ABCB6Q9NP58 842 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 PNPLA8Q9NP80 782 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.3□□□□□ -0.28
SIK3-209ENST00000480222 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
SIK3-209ENST00000480222 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 GUCA1BQ9UMX6 200 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
SIK3-209ENST00000480222 GBF1Q92538 1859 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 MACROD2A1Z1Q3 448 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 TBC1D4O60343 1298 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 FGF18O76093 207 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 ACADSBP45954 432 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 GABRB2P47870 512 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 RPL34P49207 117 aaKnown RBP13.29□□□□□ -0.28
SIK3-209ENST00000480222 TAP1Q03518 808 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 PDE4CQ08493 712 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 C9orf50Q5SZB4 431 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 SPATA2LQ8IUW3 424 aaPredicted RBP13.29□□□□□ -0.28
SIK3-209ENST00000480222 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 UBA3Q8TBC4 463 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 ATRIPQ8WXE1 791 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 C18orf8Q96DM3 657 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 SAMD11Q96NU1 681 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 GDF15Q99988 308 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 PRO3102Q9H379 93 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 DMAP1Q9NPF5 467 aaPredicted RBP13.29□□□□□ -0.28
SIK3-209ENST00000480222 TRIM10Q9UDY6 481 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 CYTH4Q9UIA0 394 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 TFR2Q9UP52 801 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 LZTS1Q9Y250 596 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 PCDHGC5Q9Y5F6 944 aa13.29□□□□□ -0.28
SIK3-209ENST00000480222 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 C5orf67F2Z3F1 127 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 AP1G2O75843 785 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 CPB1P15086 417 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 RRM1P23921 792 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 CTNNB1P35222 781 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 SCNN1AP37088 669 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 MAGEA11P43364 429 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 ETF1P62495 437 aaKnown RBP13.28□□□□□ -0.28
SIK3-209ENST00000480222 UBE3AQ05086 875 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 GPR17Q13304 367 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 SHHQ15465 462 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 CCDC142Q17RM4 750 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 SLC39A12Q504Y0 691 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 TMEM110Q86TL2 294 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 SPPL2BQ8TCT7 592 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 UBE2Q2Q8WVN8 375 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
SIK3-209ENST00000480222 KCTD13Q8WZ19 329 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 B3GALT6Q96L58 329 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 CPXM1Q96SM3 734 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 LPIN3Q9BQK8 851 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 NUP85Q9BW27 656 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 UBE2OQ9C0C9 1292 aaKnown RBP13.28□□□□□ -0.28
SIK3-209ENST00000480222 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 CTTNBP2NLQ9P2B4 639 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
SIK3-209ENST00000480222 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 E5RJQ4 531 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 CLDN5O00501 218 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 TRIM66O15016 1216 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 ATMINO43313 823 aaPredicted RBP13.27□□□□□ -0.29
SIK3-209ENST00000480222 ERBB2P04626 1255 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 RB1P06400 928 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 BMPR1AP36894 532 aa13.27□□□□□ -0.29
SIK3-209ENST00000480222 NOP2P46087 812 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms