RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 NPTX2P47972 431 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 ITIH3Q06033 890 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 CCDC142Q17RM4 750 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 PGS1Q32NB8 556 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 AKNAD1Q5T1N1 836 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 SLC30A10Q6XR72 485 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 TNPO1Q92973 898 aaKnown RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 NUP88Q99567 741 aaPredicted RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 GPR35Q9HC97 309 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 TCF7L1Q9HCS4 588 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 LMBRD1Q9NUN5 540 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 VSX1Q9NZR4 365 aaPredicted RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 CHD2O14647 1828 aaKnown RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 ACEP12821 1306 aa6.64□□□□□ -1.35
COMMD3-212ENST00000479958 NKTRP30414 1462 aaKnown RBP6.64□□□□□ -1.35
COMMD3-212ENST00000479958 ADGRB2O60241 1585 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 RGPD8O14715 1765 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 A0A0B4J269 797 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 LRRC14BA6NHZ5 514 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 IGLV2-14P01704 120 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 CT47B1P0C2W7 299 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 GRIA3P42263 894 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 PTH2RP49190 550 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 NEK2P51955 445 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 ZNF135P52742 658 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 MRPS21P82921 87 aaKnown RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 TUBB3Q13509 450 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 KIF22Q14807 665 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 ARHGEF25Q86VW2 580 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 FAM90A1Q86YD7 464 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 LPIN2Q92539 896 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 R3HDMLQ9H3Y0 253 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 ALG13Q9NP73 1137 aaKnown RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 SEMA4GQ9NTN9 838 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 PNPOQ9NVS9 261 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 BLMP54132 1417 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 CDC42BPGQ6DT37 1551 aa6.63□□□□□ -1.35
COMMD3-212ENST00000479958 COL11A2P13942 1736 aaPredicted RBP6.63□□□□□ -1.35
COMMD3-212ENST00000479958 E9PLN8 166 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 IRX6P78412 446 aaPredicted RBP6.62□□□□□ -1.35
COMMD3-212ENST00000479958 WDR43Q15061 677 aaKnown RBP eCLIP6.62□□□□□ -1.35
COMMD3-212ENST00000479958 TSHZ1Q6ZSZ6 1077 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 TFAP2BQ92481 460 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 VKORC1Q9BQB6 163 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 LRFN3Q9BTN0 628 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 C1orf43Q9BWL3 253 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 TYW1Q9NV66 732 aaKnown RBP6.62□□□□□ -1.35
COMMD3-212ENST00000479958 NR2E3Q9Y5X4 410 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 TTC21BQ7Z4L5 1316 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 POLR3AO14802 1390 aaPredicted RBP6.62□□□□□ -1.35
COMMD3-212ENST00000479958 PIK3R4Q99570 1358 aa6.62□□□□□ -1.35
COMMD3-212ENST00000479958 KIF20BQ96Q89 1820 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 AKAP12Q02952 1782 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 SHPRHQ149N8 1683 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 TOPAZ1Q8N9V7 1692 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
COMMD3-212ENST00000479958 NSD2O96028 1365 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 H3BUI4 141 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 ITGALP20701 1170 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 LPOP22079 712 aaPredicted RBP6.61□□□□□ -1.35
COMMD3-212ENST00000479958 PHKA1P46020 1223 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 IGBP1P78318 339 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 TMPRSS9Q7Z410 1059 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 USP37Q86T82 979 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 SH2D3CQ8N5H7 860 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 MAP3K14Q99558 947 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 MRPL46Q9H2W6 279 aaKnown RBP6.61□□□□□ -1.35
COMMD3-212ENST00000479958 ADARB2Q9NS39 739 aaKnown RBP6.61□□□□□ -1.35
COMMD3-212ENST00000479958 KLC4Q9NSK0 619 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 POLKQ9UBT6 870 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 IP6K2Q9UHH9 426 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 RAD54BQ9Y620 910 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 NALCNQ8IZF0 1738 aa6.61□□□□□ -1.35
COMMD3-212ENST00000479958 PRSS29PA6NIE9 313 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 APAF1O14727 1248 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 PROP1O75360 226 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 CHRM2P08172 466 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 TYRP14679 529 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 PPP3CBP16298 524 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 NDUFV1P49821 464 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 MAP2K6P52564 334 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 SOX10P56693 466 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 MC2RQ01718 297 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 ZNF362Q5T0B9 420 aaPredicted RBP6.6□□□□□ -1.35
COMMD3-212ENST00000479958 FAM98AQ8NCA5 519 aaKnown RBP6.6□□□□□ -1.35
COMMD3-212ENST00000479958 ZNF384Q8TF68 577 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 MVB12AQ96EY5 273 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 GPATCH3Q96I76 525 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 CDK5RAP3Q96JB5 506 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 OSBPL9Q96SU4 736 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 TPSD1Q9BZJ3 242 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 STRCP1A6NGW2 1772 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 MON2Q7Z3U7 1717 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 COL3A1P02461 1466 aaPredicted RBP6.6□□□□□ -1.35
COMMD3-212ENST00000479958 SSH2Q76I76 1423 aa6.6□□□□□ -1.35
COMMD3-212ENST00000479958 SMG6Q86US8 1419 aaKnown RBP6.6□□□□□ -1.35
COMMD3-212ENST00000479958 PPM1GO15355 546 aaPredicted RBP6.59□□□□□ -1.35
COMMD3-212ENST00000479958 NCLP19338 710 aaKnown RBP6.59□□□□□ -1.35
COMMD3-212ENST00000479958 C21orf58P58505 322 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms