RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 MAB21L3Q8N8X9 362 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 ATRIPQ8WXE1 791 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 MYLPFQ96A32 169 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 PCED1BQ96HM7 432 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 FAM84AQ96KN4 292 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 TNIP3Q96KP6 325 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 C8orf48Q96LL4 319 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 ELOVL4Q9GZR5 314 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 LMAN1LQ9HAT1 526 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 TCHHQ07283 1943 aa16.07■□□□□ 0.16
PRKN-207ENST00000479615 ATP8B3O60423 1300 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 TRAV19A0A0A6YYK7 116 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 ZNF202O95125 648 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 PRAMEF12O95522 483 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 C4BPAP04003 597 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 CHRNB1P11230 501 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 PTPN1P18031 435 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 CTHP32929 405 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 GPR15P49685 360 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 MYL6P60660 151 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 CSTF1Q05048 431 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 NCOA4Q13772 614 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 ZNF699Q32M78 642 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 TXNDC8Q6A555 127 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 DENND5BQ6ZUT9 1274 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 INTS8Q75QN2 995 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 USP13Q92995 863 aaPredicted RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 LRRC3BQ96PB8 259 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 DNAI2Q9GZS0 605 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 CRTAC1Q9NQ79 661 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 PRMT8Q9NR22 394 aaPredicted RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 ZSCAN32Q9NX65 697 aa16.06■□□□□ 0.16
PRKN-207ENST00000479615 NXF1Q9UBU9 619 aaKnown RBP16.06■□□□□ 0.16
PRKN-207ENST00000479615 F5P12259 2224 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 NCANO14594 1321 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 LRRIQ3A6PVS8 624 aaPredicted RBP16.05■□□□□ 0.16
PRKN-207ENST00000479615 ATP2C2O75185 946 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 TCF3P15923 654 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 BDNFP23560 247 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 PSMC1P62191 440 aaKnown RBP16.05■□□□□ 0.16
PRKN-207ENST00000479615 MTAPQ13126 283 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 ZACNQ401N2 412 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 TDRD10Q5VZ19 366 aaKnown RBP16.05■□□□□ 0.16
PRKN-207ENST00000479615 ADSSL1Q8N142 457 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 SPEM1Q8N4L4 309 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 B3GALNT2Q8NCR0 500 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 NELL1Q92832 810 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 MRPL45Q9BRJ2 306 aaKnown RBP16.05■□□□□ 0.16
PRKN-207ENST00000479615 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 IMPG2Q9BZV3 1241 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 GKN1Q9NS71 199 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 TRPM5Q9NZQ8 1165 aa16.05■□□□□ 0.16
PRKN-207ENST00000479615 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
PRKN-207ENST00000479615 CLSTN1O94985 981 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 CKMP06732 381 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 KRT13P13646 458 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 NR2F2P24468 414 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 CXCL12P48061 93 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 CDR1P51861 262 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 RUNX3Q13761 415 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 MDH1BQ5I0G3 518 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 UNC93AQ86WB7 457 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 ZBTB44Q8NCP5 570 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 GTSE1Q9NYZ3 720 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 R4GN57 208 aa16.04■□□□□ 0.16
PRKN-207ENST00000479615 PTPRZ1P23471 2315 aaPredicted RBP16.03■□□□□ 0.16
PRKN-207ENST00000479615 HCRTO43612 131 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 RTN3O95197 1032 aaPredicted RBP16.03■□□□□ 0.16
PRKN-207ENST00000479615 PAPSS2O95340 614 aaPredicted RBP16.03■□□□□ 0.16
PRKN-207ENST00000479615 HDCP19113 662 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
PRKN-207ENST00000479615 CASP4P49662 377 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 VAMP7P51809 220 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 NR1H3Q13133 447 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 SV2AQ7L0J3 742 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 GPIHBP1Q8IV16 184 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 PDZD8Q8NEN9 1154 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 CCDC26Q8TAB7 109 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 PLEKHO2Q8TD55 490 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 OVCA2Q8WZ82 227 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 SECISBP2LQ93073 1101 aaKnown RBP16.03■□□□□ 0.16
PRKN-207ENST00000479615 FAXDC2Q96IV6 333 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 SLITRK1Q96PX8 696 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 TRPC7Q9HCX4 862 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 COMMD8Q9NX08 183 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 ARHGAP26Q9UNA1 814 aa16.03■□□□□ 0.16
PRKN-207ENST00000479615 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 F8VP50 259 aa16.02■□□□□ 0.16
PRKN-207ENST00000479615 STX10O60499 249 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms