RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 NCDNQ9UBB6 729 aa15.32■□□□□ 0.04
ATG4B-218ENST00000479554 MAGEC2Q9UBF1 373 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-218ENST00000479554 SMG5Q9UPR3 1016 aaKnown RBP15.32■□□□□ 0.04
ATG4B-218ENST00000479554 KLRC4O43908 158 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 CST3P01034 146 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-218ENST00000479554 TDGF1P13385 188 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 PFKFB1P16118 471 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 BDNFP23560 247 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 CXCL12P48061 93 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 SATB1Q01826 763 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 GAS6Q14393 721 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 ZNF268Q14587 947 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-218ENST00000479554 WDR72Q3MJ13 1102 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-218ENST00000479554 VSTM1Q6UX27 236 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 OR6B3Q8NGW1 331 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 PAGE5Q96GU1 130 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 SPATA32Q96LK8 384 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 FAM83CQ9BQN1 747 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 MRPL45Q9BRJ2 306 aaKnown RBP15.31■□□□□ 0.04
ATG4B-218ENST00000479554 EPC1Q9H2F5 836 aa15.31■□□□□ 0.04
ATG4B-218ENST00000479554 EP300Q09472 2414 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-218ENST00000479554 TRAV19A0A0A6YYK7 116 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 A0A1B0GVL5 298 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 PHACTR2O75167 634 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 TACC1O75410 805 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 CLSTN1O94985 981 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 CKMP06732 381 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 USP17L7P0C7H9 530 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 ANXA13P27216 316 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 GNL1P36915 607 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-218ENST00000479554 GRIK1P39086 918 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 ID4P47928 161 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 KRT85P78386 507 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 FAM160A1Q05DH4 1040 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 STK4Q13043 487 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 PSMD2Q13200 908 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 RUNX3Q13761 415 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 WDR44Q5JSH3 913 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 Q6ZS52 159 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 DCLK2Q8N568 766 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 MYCBPAPQ8TBZ2 947 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 SYAP1Q96A49 352 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-218ENST00000479554 PCED1BQ96HM7 432 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 SPATA17Q96L03 361 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 CEP295NLQ96MC4 621 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-218ENST00000479554 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 HPS4Q9NQG7 708 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 NXF1Q9UBU9 619 aaKnown RBP15.3■□□□□ 0.04
ATG4B-218ENST00000479554 USP25Q9UHP3 1055 aa15.3■□□□□ 0.04
ATG4B-218ENST00000479554 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
ATG4B-218ENST00000479554 TRIM66O15016 1216 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
ATG4B-218ENST00000479554 FAM163BP0C2L3 166 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 CMA1P23946 247 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 ATICP31939 592 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 CASP4P49662 377 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 MYL6P60660 151 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 USP4Q13107 963 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 BIRC3Q13489 604 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 CCINQ13939 588 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 KCNB1Q14721 858 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 MTF1Q14872 753 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 DENND5BQ6ZUT9 1274 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 SYNPOQ8N3V7 929 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 TTC16Q8NEE8 873 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
ATG4B-218ENST00000479554 SLC22A12Q96S37 553 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
ATG4B-218ENST00000479554 PTPRDP23468 1912 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 PAPSS2O95340 614 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-218ENST00000479554 MYL1P05976 194 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 ARSAP15289 507 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 PTPN1P18031 435 aaKnown RBP15.28■□□□□ 0.04
ATG4B-218ENST00000479554 AP3M2P53677 418 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 AMPD2Q01433 879 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 PDGFRLQ15198 375 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 ZNF77Q15935 545 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 ZNF699Q32M78 642 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
ATG4B-218ENST00000479554 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 PARD3BQ8TEW8 1205 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 CYP2S1Q96SQ9 504 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 ELOVL4Q9GZR5 314 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 DPEP3Q9H4B8 488 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 DMAC2Q9NW81 257 aa15.28■□□□□ 0.04
ATG4B-218ENST00000479554 RAB23Q9ULC3 237 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms