RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 FNTBP49356 437 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 CDH8P55286 799 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 SURF1Q15526 300 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 KNOP1Q1ED39 458 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 ZNF528Q3MIS6 628 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 WDR72Q3MJ13 1102 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 FAM171BQ6P995 826 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 HS2ST1Q7LGA3 356 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 ZBTB44Q8NCP5 570 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 SMYD3Q9H7B4 428 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 C8orf33Q9H7E9 229 aaPredicted RBP18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 MAGEF1Q9HAY2 307 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 TDP1Q9NUW8 608 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 MAGEC2Q9UBF1 373 aaPredicted RBP18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 SMG5Q9UPR3 1016 aaKnown RBP18.59■□□□□ 0.57
ECHDC1-216ENST00000479525 ID4P47928 161 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 PXNP49023 591 aaPredicted RBP18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 DLG4P78352 724 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 ORC1Q13415 861 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 LIMS2Q7Z4I7 341 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 RMDN1Q96DB5 314 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 PCED1BQ96HM7 432 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 SNX25Q9H3E2 840 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 SEMA4AQ9H3S1 761 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 KIAA1586Q9HCI6 787 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 EXOC1Q9NV70 894 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 OBP2AQ9NY56 170 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 CFAP45Q9UL16 551 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 CDH9Q9ULB4 789 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 PCDHGA2Q9Y5H1 932 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 WNT6Q9Y6F9 365 aa18.58■□□□□ 0.57
ECHDC1-216ENST00000479525 LRRIQ3A6PVS8 624 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 PHACTR2O75167 634 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 CKMP06732 381 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 SLFN14P0C7P3 912 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 TNNC1P63316 161 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 BIRC3Q13489 604 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 TRPC3Q13507 836 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 RUNX3Q13761 415 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 BMT2Q1RMZ1 405 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 ITPRIPL2Q3MIP1 535 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 TDRD10Q5VZ19 366 aaKnown RBP18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 PRR23BQ6ZRT6 265 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 MON1AQ86VX9 555 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 RALGPS2Q86X27 583 aaPredicted RBP18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 RUBCNQ92622 972 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 SPATA32Q96LK8 384 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 FAM83CQ9BQN1 747 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 ZNF518BQ9C0D4 1074 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 SDCBP2Q9H190 292 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 FBRSL1Q9HCM7 1045 aaKnown RBP18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 ABCB6Q9NP58 842 aa18.57■□□□□ 0.56
ECHDC1-216ENST00000479525 PVALEFA0A1B0GWK0 134 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 ANTXRLA6NF34 631 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 F8VP50 259 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 LILRB5O75023 590 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 ABL1P00519 1130 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 GNL1P36915 607 aaPredicted RBP18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 CXCL12P48061 93 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 CCR3P51677 355 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 FSTL4Q6MZW2 842 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 C4orf50Q6ZRC1 276 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 NELL1Q92832 810 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 XYLT2Q9H1B5 865 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 GOLPH3LQ9H4A5 285 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 THG1LQ9NWX6 298 aaKnown RBP18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 UXTQ9UBK9 157 aaPredicted RBP18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 MAPK8IP1Q9UQF2 711 aa18.56■□□□□ 0.56
ECHDC1-216ENST00000479525 EGFP01133 1207 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 NDUFA8P51970 172 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 ZXDBP98169 803 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 CCINQ13939 588 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 LRRC32Q14392 662 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 MTF1Q14872 753 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 ZNF77Q15935 545 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 SPOPLQ6IQ16 392 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 DPH6Q7L8W6 267 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 MYCBPAPQ8TBZ2 947 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 FUBP3Q96I24 572 aaKnown RBP eCLIP18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 B3GNT5Q9BYG0 378 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 TRAV19A0A0A6YYK7 116 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 A8MXQ7 604 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 K7ESF4 209 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 VNN1O95497 513 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 DDX6P26196 483 aaKnown RBP eCLIP18.55■□□□□ 0.562e-7■■■□□ 18.3
ECHDC1-216ENST00000479525 ANXA13P27216 316 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 WEE1P30291 646 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 PLCB2Q00722 1185 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 CEP135Q66GS9 1140 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 SPATA18Q8TC71 538 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 SH3RF2Q8TEC5 729 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 TRMT2BQ96GJ1 504 aaKnown RBP18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 MYRFLQ96LU7 910 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 LINC00597Q9H2U6 94 aa18.55■□□□□ 0.56
ECHDC1-216ENST00000479525 KCTD10Q9H3F6 313 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms