RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.91□□□□□ -0.18
ABCF3-212ENST00000478288 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 GOLGA8IPA6NC78 632 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 ZNF233A6NK53 670 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 GOLGA8JA6NMD2 632 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 EIF3DO15371 548 aaKnown RBP eCLIP13.91□□□□□ -0.18
ABCF3-212ENST00000478288 RNF40O75150 1001 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 RPP40O75818 363 aaKnown RBP13.91□□□□□ -0.18
ABCF3-212ENST00000478288 EPN2O95208 641 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 TNNC2P02585 160 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 CKMP06732 381 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 KRT19P08727 400 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 ARSAP15289 507 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 GJA4P35212 333 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 DUOXA2Q1HG44 320 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 SDHAF4Q5VUM1 108 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 SYT13Q7L8C5 426 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 WDR49Q8IV35 697 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 KBTBD7Q8WVZ9 684 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 HPDLQ96IR7 371 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 ECT2Q9H8V3 914 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 GCNT4Q9P109 453 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 ARHGAP26Q9UNA1 814 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 SLC8A2Q9UPR5 921 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
ABCF3-212ENST00000478288 ABCA7Q8IZY2 2146 aa13.91□□□□□ -0.18
ABCF3-212ENST00000478288 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
ABCF3-212ENST00000478288 EGFP01133 1207 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 ZNF806P0C7X5 589 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 SNRPFP62306 86 aaKnown RBP13.9□□□□□ -0.18
ABCF3-212ENST00000478288 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
ABCF3-212ENST00000478288 E2F4Q16254 413 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 EML3Q32P44 896 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 SCARA3Q6AZY7 606 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 ACDQ96AP0 544 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 SYT15Q9BQS2 421 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 TRIM9Q9C026 710 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 PCIF1Q9H4Z3 704 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
ABCF3-212ENST00000478288 EBF1Q9UH73 591 aa13.9□□□□□ -0.18
ABCF3-212ENST00000478288 UBE4BO95155 1302 aa13.9□□□□□ -0.19
ABCF3-212ENST00000478288 PTPRJQ12913 1337 aa13.9□□□□□ -0.19
ABCF3-212ENST00000478288 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 TRIM66O15016 1216 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 PPP6R2O75170 966 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 WARSP23381 471 aaKnown RBP13.89□□□□□ -0.19
ABCF3-212ENST00000478288 PPP3CCP48454 512 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 IFNAR2P48551 515 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 GALK1P51570 392 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 NOP14P78316 857 aaKnown RBP13.89□□□□□ -0.19
ABCF3-212ENST00000478288 AMPD3Q01432 767 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 KCNB1Q14721 858 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 PLA2G2CQ5R387 149 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 EPM2AIP1Q7L775 607 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-212ENST00000478288 CBWD2Q8IUF1 395 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 LINC00301Q8NCQ3 95 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 CD101Q93033 1021 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 SLC22A12Q96S37 553 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 TTLL2Q9BWV7 592 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 MAGEF1Q9HAY2 307 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
ABCF3-212ENST00000478288 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 HSPBP1Q9NZL4 362 aa13.89□□□□□ -0.19
ABCF3-212ENST00000478288 MAGEC2Q9UBF1 373 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-212ENST00000478288 PI4KAP42356 2102 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 STX6O43752 255 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 TACC1O75410 805 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 NFATC1O95644 943 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 APBB3O95704 486 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
ABCF3-212ENST00000478288 OLFM2O95897 454 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 CCDC192P0DO97 292 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 HDCP19113 662 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 HOXD13P35453 343 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 NR1H3Q13133 447 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 SNRNP35Q16560 246 aaKnown RBP13.88□□□□□ -0.19
ABCF3-212ENST00000478288 CCDC142Q17RM4 750 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 PPM1JQ5JR12 505 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 DENND5BQ6ZUT9 1274 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 PDILTQ8N807 584 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
ABCF3-212ENST00000478288 GLIS3Q8NEA6 775 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 MYCBPAPQ8TBZ2 947 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 ZNF507Q8TCN5 953 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 SH3RF2Q8TEC5 729 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 MYLPFQ96A32 169 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 CNTNAP3BQ96NU0 1288 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 CYP2S1Q96SQ9 504 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
ABCF3-212ENST00000478288 CNTNAP3Q9BZ76 1288 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms