RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	MBD1	Q9UIS9	605 aa	Predicted RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	CPSF3	Q9UKF6	684 aa	Known RBP	11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PILRB	Q9UKJ0	227 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	SLC6A14	Q9UN76	642 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	ANAPC1	Q9H1A4	1944 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	ADAMTS9	Q9P2N4	1935 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279	PLXND1	Q9Y4D7	1925 aa		11.41	□□□□□ -0.58
APTX-222	ENST00000478279		A0A0B4J269	797 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	OPHN1	O60890	802 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	SEC24B	O95487	1268 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	PIGR	P01833	764 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	CFI	P05156	583 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	TCF3	P15923	654 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	ITPKA	P23677	461 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	ANAPC15	P60006	121 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	RPL10A	P62906	217 aa	Known RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	FAM193A	P78312	1265 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	SCAP	Q12770	1279 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	NBR1	Q14596	966 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	DDR2	Q16832	855 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	MAP7D1	Q3KQU3	841 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	SDHAF4	Q5VUM1	108 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	LYSMD4	Q5XG99	296 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	FRMD1	Q8N878	549 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	SYT2	Q8N9I0	419 aa	Predicted RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	CEP76	Q8TAP6	659 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	C8orf76	Q96K31	380 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	MMTAG2	Q9BU76	263 aa	Known RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	MSTO1	Q9BUK6	570 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	GTPBP2	Q9BX10	602 aa	Known RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	ASB7	Q9H672	318 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	POLM	Q9NP87	494 aa	Predicted RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	GCNT4	Q9P109	453 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	NOL7	Q9UMY1	257 aa	Known RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	C2CD2	Q9Y426	696 aa		11.4	□□□□□ -0.58
APTX-222	ENST00000478279	URB1	O60287	2271 aa	Known RBP	11.4	□□□□□ -0.58
APTX-222	ENST00000478279	CEP192	Q8TEP8	1941 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	SGK1	O00141	431 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	SERPINF2	P08697	491 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	SCP2	P22307	547 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	GFPT1	Q06210	699 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	IL17A	Q16552	155 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	DUOXA1	Q1HG43	343 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	COL28A1	Q2UY09	1125 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	GAB4	Q2WGN9	574 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	HSF5	Q4G112	596 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	KCTD17	Q8N5Z5	321 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ALLC	Q8N6M5	410 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	FSIP1	Q8NA03	581 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	TXNDC5	Q8NBS9	432 aa	Known RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	LRRC15	Q8TF66	581 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	LEO1	Q8WVC0	666 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-222	ENST00000478279	CAPN10	Q9HC96	672 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ABCB6	Q9NP58	842 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	DPP3	Q9NY33	737 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	KCND2	Q9NZV8	630 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ARHGAP26	Q9UNA1	814 aa		11.39	□□□□□ -0.59
APTX-222	ENST00000478279	ATXN2	Q99700	1313 aa	Known RBP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	KALRN	O60229	2985 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	MYMK	A6NI61	221 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	KPNA7	A9QM74	516 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	LAD1	O00515	517 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	PLA2G4B	P0C869	781 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	CHRM1	P11229	460 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	CD59	P13987	128 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	HDC	P19113	662 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	CYP2F1	P24903	491 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	SLC12A3	P55017	1021 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	GNL2	Q13823	731 aa	Known RBP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	KCNB1	Q14721	858 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	ZRSR1	Q15695	479 aa	Known RBP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	SV2C	Q496J9	727 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	EOGT	Q5NDL2	527 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	HYI	Q5T013	277 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	SLC39A4	Q6P5W5	647 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	DTHD1	Q6ZMT9	781 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	MINDY1	Q8N5J2	469 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	IL17RC	Q8NAC3	791 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	FBXO18	Q8NFZ0	1043 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	ADAMTS14	Q8WXS8	1223 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	PNMA5	Q96PV4	448 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	ACBD6	Q9BR61	282 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	CCDC86	Q9H6F5	360 aa	Known RBP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	FSCN3	Q9NQT6	498 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
APTX-222	ENST00000478279	PCDHB6	Q9Y5E3	794 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	MYOF	Q9NZM1	2061 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	MAST4	O15021	2626 aa		11.38	□□□□□ -0.59
APTX-222	ENST00000478279	PLXNB3	Q9ULL4	1909 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279		A0A0A0MRY4	1105 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	C2orf78	A6NCI8	922 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	ARHGAP33	O14559	1287 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	AP5Z1	O43299	807 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	KAT7	O95251	611 aa		11.37	□□□□□ -0.59
APTX-222	ENST00000478279	KLF8	O95600	359 aa	Predicted RBP	11.37	□□□□□ -0.59
APTX-222	ENST00000478279	CYP17A1	P05093	508 aa		11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms