RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 HNRNPLP14866 589 aaKnown RBP eCLIP21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 HOXD12P35452 270 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 DDR2Q16832 855 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 SV2CQ496J9 727 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 ARSHQ5FYA8 562 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 LMBRD2Q68DH5 695 aaPredicted RBP21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 SLC23A3Q6PIS1 610 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 TMEM92Q6UXU6 159 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 ARMCX6Q7L4S7 300 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 WHAMMQ8TF30 809 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 DPP3Q9NY33 737 aa21.79■■□□□ 1.08
PDLIM1-202ENST00000477757 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 ANTXRLA6NF34 631 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 KPNA7A9QM74 516 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 CHRM1P11229 460 aaPredicted RBP21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 NEK4P51957 841 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 MRPS21P82921 87 aaKnown RBP21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 GAB4Q2WGN9 574 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 SPDYCQ5MJ68 293 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 TMEFF1Q8IYR6 380 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 RLN3Q8WXF3 142 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 ZNF560Q96MR9 790 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 LLPHQ9BRT6 129 aaKnown RBP21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 ARHGAP26Q9UNA1 814 aa21.78■■□□□ 1.08
PDLIM1-202ENST00000477757 CYP2F1P24903 491 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 ACOT2P49753 483 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 KCNB1Q14721 858 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 TMEM119Q4V9L6 283 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 ZC2HC1CQ53FD0 456 aaPredicted RBP21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 LYSMD4Q5XG99 296 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 TTC30AQ86WT1 665 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 CCDC83Q8IWF9 413 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 ARL14EPQ8N8R7 260 aaPredicted RBP21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 REEP2Q9BRK0 252 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 LINC00597Q9H2U6 94 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 MBD1Q9UIS9 605 aaPredicted RBP21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 PILRBQ9UKJ0 227 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 GPSM3Q9Y4H4 160 aa21.77■■□□□ 1.08
PDLIM1-202ENST00000477757 ATXN2Q99700 1313 aaKnown RBP21.77■■□□□ 1.07
PDLIM1-202ENST00000477757 ANAPC1Q9H1A4 1944 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 C2orf78A6NCI8 922 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 MAP3K13O43283 966 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 RDXP35241 583 aaKnown RBP21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 ZNF131P52739 623 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 HSF5Q4G112 596 aaPredicted RBP21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 INTS6LQ5JSJ4 861 aaKnown RBP21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 PDCL2Q8N4E4 241 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 HDDC3Q8N4P3 179 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 ALLCQ8N6M5 410 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 PLIN2Q99541 437 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 PKMYT1Q99640 499 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 ACBD6Q9BR61 282 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 CIZ1Q9ULV3 898 aaPredicted RBP21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 ADAMTS20P59510 1910 aa21.76■■□□□ 1.07
PDLIM1-202ENST00000477757 CFIP05156 583 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 PNPLA4P41247 253 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 HMGN5P82970 282 aaKnown RBP21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 POU5F1Q01860 360 aaKnown RBP21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 ZNF423Q2M1K9 1284 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 MAP7D1Q3KQU3 841 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 CFAP221Q4G0U5 840 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 RAB44Q7Z6P3 723 aaPredicted RBP21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 FRMD1Q8N878 549 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 FSIP1Q8NA03 581 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 IL17RCQ8NAC3 791 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 CDK5RAP3Q96JB5 506 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 PARVGQ9HBI0 331 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 POLMQ9NP87 494 aaPredicted RBP21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 L1RE1Q9UN81 338 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 PCDH15Q96QU1 1955 aa21.75■■□□□ 1.07
PDLIM1-202ENST00000477757 PI4KAP42356 2102 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 SGK1O00141 431 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 KLF8O95600 359 aaPredicted RBP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 CYP17A1P05093 508 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 ITPKAP23677 461 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 ABCD1P33897 745 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 PDE6CP51160 858 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 ATXN3P54252 364 aaPredicted RBP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 BYSLQ13895 437 aaKnown RBP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 ADALQ6DHV7 355 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 CHCHD4Q8N4Q1 142 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 MYCT1Q8N699 235 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 TXNDC5Q8NBS9 432 aaKnown RBP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 SPATA18Q8TC71 538 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 DDX43Q9NXZ2 648 aaKnown RBP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 BCCIPQ9P287 314 aaKnown RBP eCLIP21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 SLC6A14Q9UN76 642 aa21.74■■□□□ 1.07
PDLIM1-202ENST00000477757 TISP43B9A030 160 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 ANKRD63C9JTQ0 380 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 FAM13AO94988 1023 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 HDCP19113 662 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 ACAT1P24752 427 aaKnown RBP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 EIF2DP41214 584 aaKnown RBP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 FAM193AP78312 1265 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 ZXDBP98169 803 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 ATP2C1P98194 919 aaPredicted RBP21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 GTF2BQ00403 316 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 CCDC142Q17RM4 750 aa21.73■■□□□ 1.07
PDLIM1-202ENST00000477757 SOWAHCQ53LP3 525 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms