RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 BCAT1P54687 386 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 DENND1BQ6P3S1 775 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 VPS36Q86VN1 386 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 TTC30AQ86WT1 665 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 PASD1Q8IV76 773 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 TTC9BQ8N6N2 239 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 ANKRD52Q8NB46 1076 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 OLIG1Q8TAK6 271 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 CEP83Q9Y592 693 aa17.14■□□□□ 0.33
VHL-203ENST00000477538 SSU72P8A0A1W2PR75 194 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 SEC24AO95486 1093 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 NPR3P17342 541 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 ELF1P32519 619 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 MAGEA11P43364 429 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 CLCN4P51793 760 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 BST2Q10589 180 aaKnown RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 DUSP4Q13115 394 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 DUSP6Q16828 381 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 PKDCCQ504Y2 493 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 HABP4Q5JVS0 413 aaKnown RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 LILRA6Q6PI73 481 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 VSTM1Q6UX27 236 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 TRIM72Q6ZMU5 477 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 CLEC20AQ6ZU45 233 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 UBA3Q8TBC4 463 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 FAM161BQ96MY7 647 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 SEPT5Q99719 369 aaPredicted RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 BAG1Q99933 345 aaPredicted RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.13■□□□□ 0.33
VHL-203ENST00000477538 DUSP16Q9BY84 665 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 LHX5Q9H2C1 402 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 CRISPLD1Q9H336 500 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 DEF6Q9H4E7 631 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 NSUN3Q9H649 340 aaKnown RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 TLE6Q9H808 572 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 CYP4F11Q9HBI6 524 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
VHL-203ENST00000477538 TMEM30AQ9NV96 361 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 LMCD1Q9NZU5 365 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 HSFX1Q9UBD0 423 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 FBXW11Q9UKB1 542 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 MAFFQ9ULX9 164 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
VHL-203ENST00000477538 PER2O15055 1255 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 BEST1O76090 585 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SETSIPP0DME0 302 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 HAPLN1P10915 354 aaPredicted RBP17.12■□□□□ 0.33
VHL-203ENST00000477538 ANXA13P27216 316 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 GRIK1P39086 918 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 NRIP1P48552 1158 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 CACNA2D1P54289 1103 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SLC8A3P57103 927 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 PDE4CQ08493 712 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 MGAT5BQ3V5L5 792 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 TMTC1Q8IUR5 882 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 TMEM139Q8IV31 216 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SCN4BQ8IWT1 228 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 SECISBP2LQ93073 1101 aaKnown RBP17.12■□□□□ 0.33
VHL-203ENST00000477538 CCDC42Q96M95 316 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 PCDHB18PQ96TA0 734 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 CDCA3Q99618 268 aaPredicted RBP17.12■□□□□ 0.33
VHL-203ENST00000477538 SMOQ99835 787 aa17.12■□□□□ 0.33
VHL-203ENST00000477538 F8VP50 259 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 DDX3XO00571 662 aaKnown RBP eCLIP17.11■□□□□ 0.33
VHL-203ENST00000477538 PRRG1O14668 218 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 XPO1O14980 1071 aaKnown RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 TRIM66O15016 1216 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 AKR1B10O60218 316 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 SOAT2O75908 522 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 LSM8O95777 96 aaKnown RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 C1RP00736 705 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 CYP1A1P04798 512 aaPredicted RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 CDH5P33151 784 aaPredicted RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 GPD2P43304 727 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 TUFMP49411 452 aaKnown RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 MAP3K7CLP57077 242 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 NOMO3P69849 1222 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 CLEC16AQ2KHT3 1053 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 NAA35Q5VZE5 725 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 TCEAL8Q8IYN2 117 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 KREMEN2Q8NCW0 462 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
VHL-203ENST00000477538 ZMIZ2Q8NF64 920 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 SLC30A5Q8TAD4 765 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 KCNK16Q96T55 309 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 ADAMTS1Q9UHI8 967 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 BRWD1Q9NSI6 2320 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms