RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 KCNT1Q5JUK3 1230 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 LIN9Q5TKA1 542 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 C18orf8Q96DM3 657 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 RGS18Q9NS28 235 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 GIT1Q9Y2X7 761 aa12.48□□□□□ -0.41
TNRC6A-206ENST00000477487 NT5C1B-RDH14C9J2C7 533 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 RAD51CO43502 376 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 PROSCO94903 275 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 OR4Q2P0C623 313 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 IL1R2P27930 398 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 FLT3P36888 993 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 PAFAH1B1P43034 410 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 NDUFV1P49821 464 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LBX1P52954 281 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 PRMT2P55345 433 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 MDH1BQ5I0G3 518 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 DCUN1D2Q6PH85 259 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 FUKQ8N0W3 1084 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 21.9
TNRC6A-206ENST00000477487 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ZNF560Q96MR9 790 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 KCNK16Q96T55 309 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LHX5Q9H2C1 402 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 TMLHEQ9NVH6 421 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ZRANB2O95218 330 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LSM8O95777 96 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LCP1P13796 627 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 TCF3P15923 654 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 CTNNA1P35221 906 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 CKAP4Q07065 602 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ARHGEF6Q15052 776 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LONRF2Q1L5Z9 754 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 SV2CQ496J9 727 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 OR6B2Q6IFH4 312 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 DSTYKQ6XUX3 929 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ZNF572Q7Z3I7 529 aaPredicted RBP12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 10.2
TNRC6A-206ENST00000477487 PARVAQ9NVD7 372 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 AMACRQ9UHK6 382 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 TMEM59LQ9UK28 342 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 ATP11BQ9Y2G3 1177 aa12.47□□□□□ -0.41
TNRC6A-206ENST00000477487 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 KRIT1O00522 736 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 ENPP3O14638 875 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PAPSS1O43252 624 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 MED7O43513 233 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 KRT10P13645 584 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 KCNJ1P48048 391 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 CDO1Q16878 200 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 FAM102AQ5T9C2 384 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 SLC39A5Q6ZMH5 540 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 TMEM173Q86WV6 379 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 RASGEF1CQ8N431 466 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 B3GALNT2Q8NCR0 500 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 SLC35F5Q8WV83 523 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PCSK1NQ9UHG2 260 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 R3HDM2Q9Y2K5 976 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PGRMC1O00264 195 aaKnown RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 SASH3O75995 380 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 UPP2O95045 317 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 KRT3P12035 628 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 TTC27Q6P3X3 843 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 SLC24A5Q71RS6 500 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 PRUNE1Q86TP1 453 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 OR10T2Q8NGX3 314 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 CFAP57Q96MR6 1250 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 TRIM51Q9BSJ1 452 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 SELENOOQ9BVL4 669 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
TNRC6A-206ENST00000477487 TSC2P49815 1807 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 CALB1P05937 261 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 CD48P09326 243 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 MYBL1P10243 752 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 ATP11AP98196 1134 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 KRT222Q8N1A0 295 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 MMGT1Q8N4V1 131 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 C3orf20Q8ND61 904 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 C1orf54Q8WWF1 131 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 RAPGEF5Q92565 580 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 PBKQ96KB5 322 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 HIPK3Q9H422 1215 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 ZWILCHQ9H900 591 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 ARFGAP3Q9NP61 516 aa12.46□□□□□ -0.42
TNRC6A-206ENST00000477487 TBC1D13Q9NVG8 400 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms