RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NOLC1Q14978 699 aaKnown RBP eCLIP16.59■□□□□ 0.25
SMG5-204ENST00000476954 PCSK4Q6UW60 755 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 C12orf40Q86WS4 652 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 BHMT2Q9H2M3 363 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 ARHGAP28Q9P2N2 729 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 UBQLN1Q9UMX0 589 aaKnown RBP16.59■□□□□ 0.25
SMG5-204ENST00000476954 COL6A6A6NMZ7 2263 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 PIEZO2Q9H5I5 2752 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 KNTC1P50748 2209 aa16.58■□□□□ 0.25
SMG5-204ENST00000476954 IGHV1OR15-9A0A0B4J2B8 117 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 A0A1W2PQD8 194 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 C2orf78A6NCI8 922 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 LACTBL1A8MY62 500 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 NFATC1O95644 943 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 CYP17A1P05093 508 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 USP17L7P0C7H9 530 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 GABRG2P18507 467 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 CYP3A5P20815 502 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 MAOBP27338 520 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 ZXDBP98169 803 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 KDSRQ06136 332 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 GRIK2Q13002 908 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 EOGTQ5NDL2 527 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
SMG5-204ENST00000476954 PI4K2AQ9BTU6 479 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 CD93Q9NPY3 652 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 GCNT4Q9P109 453 aa16.58■□□□□ 0.24
SMG5-204ENST00000476954 CABIN1Q9Y6J0 2220 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 STK36Q9NRP7 1315 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 TRAV19A0A0A6YYK7 116 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 SLC16A4O15374 487 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 ARHGAP6O43182 974 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 DKK1O94907 266 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 KAT7O95251 611 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 RPA1P27694 616 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 DDR2Q16832 855 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 SLC36A4Q6YBV0 504 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 RGL4Q8IZJ4 473 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 BAHD1Q8TBE0 780 aaPredicted RBP16.57■□□□□ 0.24
SMG5-204ENST00000476954 SPPL2BQ8TCT7 592 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 HNRNPABQ99729 332 aaKnown RBP16.57■□□□□ 0.24
SMG5-204ENST00000476954 TMEM206Q9H813 350 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 KMT5AQ9NQR1 393 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 CYP8B1Q9UNU6 501 aa16.57■□□□□ 0.24
SMG5-204ENST00000476954 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
SMG5-204ENST00000476954 CYP11A1P05108 521 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 KRT2P35908 639 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 WASP42768 502 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 CFHR1Q03591 330 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMG5-204ENST00000476954 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
SMG5-204ENST00000476954 ZNF274Q96GC6 653 aaPredicted RBP16.56■□□□□ 0.24
SMG5-204ENST00000476954 FCRL3Q96P31 734 aaPredicted RBP16.56■□□□□ 0.24
SMG5-204ENST00000476954 PNKPQ96T60 521 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
SMG5-204ENST00000476954 MGAQ8IWI9 3026 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 SFI1A8K8P3 1242 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 TLX3O43711 291 aaPredicted RBP16.55■□□□□ 0.24
SMG5-204ENST00000476954 HIP1RO75146 1068 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 TOM1L1O75674 476 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 CSH1P0DML2 217 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 CSH2P0DML3 217 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
SMG5-204ENST00000476954 MAPK7Q13164 816 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 CCDC157Q569K6 752 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 C9orf57Q5W0N0 161 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 WSCD1Q658N2 575 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
SMG5-204ENST00000476954 MYH11P35749 1972 aa16.55■□□□□ 0.24
SMG5-204ENST00000476954 MYMKA6NI61 221 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 NOL4O94818 638 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 APODP05090 189 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 CLTAP09496 248 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 XBP1P17861 261 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 MCM7P33993 719 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 PPP2R3AQ06190 1150 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 MCL1Q07820 350 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 SCRN1Q12765 414 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 DHCR24Q15392 516 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 ENOX2Q16206 610 aaKnown RBP16.54■□□□□ 0.24
SMG5-204ENST00000476954 CCDC142Q17RM4 750 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 FILIP1Q7Z7B0 1213 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 PDCD7Q8N8D1 485 aaKnown RBP16.54■□□□□ 0.24
SMG5-204ENST00000476954 LSM14AQ8ND56 463 aaKnown RBP16.54■□□□□ 0.24
SMG5-204ENST00000476954 SPATA18Q8TC71 538 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 RUSC1Q9BVN2 902 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 ARHGEF4Q9NR80 690 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 HCN2Q9UL51 889 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 BTBD3Q9Y2F9 522 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 FNDC3AQ9Y2H6 1198 aaKnown RBP16.54■□□□□ 0.24
SMG5-204ENST00000476954 PCDHB5Q9Y5E4 795 aa16.54■□□□□ 0.24
SMG5-204ENST00000476954 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
SMG5-204ENST00000476954 PIRO00625 290 aa16.53■□□□□ 0.24
SMG5-204ENST00000476954 CYB561D2O14569 222 aa16.53■□□□□ 0.24
SMG5-204ENST00000476954 CLDN3O15551 220 aa16.53■□□□□ 0.24
SMG5-204ENST00000476954 HDCP19113 662 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms