RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 TMEM209Q96SK2 561 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 DUSP16Q9BY84 665 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 CWH43Q9H720 699 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 VWA8A3KMH1 1905 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 ZNF185O15231 689 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 TCP1P17987 556 aaKnown RBP30.43■■■□□ 2.46
VEGFA-211ENST00000476772 COMTP21964 271 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 CXCR5P32302 372 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 PLCB3Q01970 1234 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 PPIGQ13427 754 aaKnown RBP eCLIP30.43■■■□□ 2.464e-9■■□□□ 11.4
VEGFA-211ENST00000476772 TMEM173Q86WV6 379 aaPredicted RBP30.43■■■□□ 2.46
VEGFA-211ENST00000476772 PKMYT1Q99640 499 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 SELENOOQ9BVL4 669 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 GPR62Q9BZJ7 368 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 PTPRSQ13332 1948 aa30.43■■■□□ 2.46
VEGFA-211ENST00000476772 MYO1FO00160 1098 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 SYN3O14994 580 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FAM171A1Q5VUB5 890 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FUT10Q6P4F1 479 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FAM171BQ6P995 826 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FAM35AQ86V20 835 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 MYLPFQ96A32 169 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 MCRS1Q96EZ8 462 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 HES6Q96HZ4 224 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 RC3H2Q9HBD1 1191 aaKnown RBP30.42■■■□□ 2.46
VEGFA-211ENST00000476772 KRT82Q9NSB4 513 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 SF3B1O75533 1304 aaKnown RBP eCLIP30.42■■■□□ 2.461e-17■■■■■ 34.8
VEGFA-211ENST00000476772 TMEM191CA6NGB0 347 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 GABBR2O75899 941 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 NPR3P17342 541 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FPGSQ05932 587 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 DCUN1D2Q6PH85 259 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 FAM183BPQ6ZVS7 135 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 TMEM110Q86TL2 294 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 COG1Q8WTW3 980 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 BCL7CQ8WUZ0 217 aaPredicted RBP30.42■■■□□ 2.46
VEGFA-211ENST00000476772 CARD6Q9BX69 1037 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 MIS12Q9H081 205 aa30.42■■■□□ 2.46
VEGFA-211ENST00000476772 XPO1O14980 1071 aaKnown RBP30.41■■■□□ 2.46
VEGFA-211ENST00000476772 OAZ2O95190 189 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 PLA2G4AP47712 749 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 TSPY1Q01534 308 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 TAP1Q03518 808 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 WHAMMP3Q1A5X7 153 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 OR6B2Q6IFH4 312 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 CAPZA3Q96KX2 299 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 METTL5Q9NRN9 209 aaKnown RBP30.41■■■□□ 2.46
VEGFA-211ENST00000476772 TMLHEQ9NVH6 421 aa30.41■■■□□ 2.46
VEGFA-211ENST00000476772 SIGLEC16A6NMB1 481 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 BEST1O76090 585 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 SLU7O95391 586 aaKnown RBP30.4■■■□□ 2.46
VEGFA-211ENST00000476772 FAM200BP0CF97 657 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 VARS2Q5ST30 1063 aaKnown RBP30.4■■■□□ 2.46
VEGFA-211ENST00000476772 CLEC20AQ6ZU45 233 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 LRRTM3Q86VH5 581 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 CEP57Q86XR8 500 aa30.4■■■□□ 2.46
VEGFA-211ENST00000476772 SPOPO43791 374 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 PROSCO94903 275 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 KRT3P12035 628 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 RPL34P49207 117 aaKnown RBP30.39■■■□□ 2.46
VEGFA-211ENST00000476772 ALDH7A1P49419 539 aaKnown RBP30.39■■■□□ 2.46
VEGFA-211ENST00000476772 SLC8A3P57103 927 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 FAM102AQ5T9C2 384 aaPredicted RBP30.39■■■□□ 2.46
VEGFA-211ENST00000476772 ZNF365Q70YC5 407 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 LRRN4CLQ8ND94 238 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 MYRIPQ8NFW9 859 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 JOSD2Q8TAC2 188 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 B3GALT6Q96L58 329 aa30.39■■■□□ 2.46
VEGFA-211ENST00000476772 ZBBXA8MT70 800 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 KCNK3O14649 394 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 DDX3YO15523 660 aaKnown RBP30.39■■■□□ 2.45
VEGFA-211ENST00000476772 AP1G2O75843 785 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 FGFR3P22607 806 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 OGDHQ02218 1023 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 PIGZQ86VD9 579 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 PIWIL1Q96J94 861 aaKnown RBP30.39■■■□□ 2.45
VEGFA-211ENST00000476772 CYLDQ9NQC7 956 aa30.39■■■□□ 2.45
VEGFA-211ENST00000476772 FGBP02675 491 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 RFC1P35251 1148 aaPredicted RBP30.38■■■□□ 2.45
VEGFA-211ENST00000476772 MAP3K7CLP57077 242 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 SNX16P57768 344 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 ZNF252P-AS1Q0IIN9 211 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 ELAVL2Q12926 359 aaKnown RBP30.38■■■□□ 2.45
VEGFA-211ENST00000476772 CD101Q93033 1021 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 HSFY1Q96LI6 401 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 SMOQ99835 787 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 RHOBTB2Q9BYZ6 727 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 IP6K2Q9UHH9 426 aa30.38■■■□□ 2.45
VEGFA-211ENST00000476772 NLRC5Q86WI3 1866 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 PAPSS1O43252 624 aaPredicted RBP30.37■■■□□ 2.45
VEGFA-211ENST00000476772 CACNA2D1P54289 1103 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 EPHB4P54760 987 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 MAPRE1Q15691 268 aaKnown RBP30.37■■■□□ 2.45
VEGFA-211ENST00000476772 SPOUT1Q5T280 376 aaKnown RBP30.37■■■□□ 2.45
VEGFA-211ENST00000476772 OLFML1Q6UWY5 402 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 CREG2Q8IUH2 290 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 CMTR2Q8IYT2 770 aaKnown RBP30.37■■■□□ 2.45
VEGFA-211ENST00000476772 SMARCD1Q96GM5 515 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 TMEM30AQ9NV96 361 aa30.37■■■□□ 2.45
VEGFA-211ENST00000476772 CAPN15O75808 1086 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms