RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 SPOUT1Q5T280 376 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 MPZL3Q6UWV2 235 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 GK5Q6ZS86 529 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 RBM43Q6ZSC3 357 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 MIER3Q7Z3K6 550 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 NEK8Q86SG6 692 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 FAM228AQ86W67 206 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 THNSL1Q8IYQ7 743 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 KIAA0319LQ8IZA0 1049 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 BLIDQ8IZY5 108 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 AOPEPQ8N6M6 819 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 METTL13Q8N6R0 699 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CYP2W1Q8TAV3 490 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CACTINQ8WUQ7 758 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 TRAPPC12Q8WVT3 735 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 PHKBQ93100 1093 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 MAP6Q96JE9 813 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 C8orf76Q96K31 380 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 FAM20AQ96MK3 541 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CCDC43Q96MW1 224 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 MBOAT7Q96N66 472 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 ZNF558Q96NG5 402 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 NECTIN4Q96NY8 510 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 ADAM2Q99965 735 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 SRRTQ9BXP5 876 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 GCOM2Q9BZD3 368 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 NGRNQ9NPE2 291 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CHST12Q9NRB3 414 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 NRBP2Q9NSY0 501 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM260Q9NX78 707 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 VPS54Q9P1Q0 977 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 ORC3Q9UBD5 711 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 GABBR1Q9UBS5 961 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 SUCOQ9UBS9 1254 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 PUF60Q9UHX1 559 aaKnown RBP4.65□□□□□ -1.67
VPS13D-206ENST00000476045 ST3GAL5Q9UNP4 418 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 KIF3AQ9Y496 699 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 PCDHB7Q9Y5E2 793 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CNTNAP2Q9UHC6 1331 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 MYO10Q9HD67 2058 aa4.65□□□□□ -1.67
VPS13D-206ENST00000476045 CFAP54Q96N23 3096 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 A0A0U1RQF3 1178 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TBKBP1A7MCY6 615 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 BECN2A8MW95 431 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 H3BQ06 376 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GRM6O15303 877 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 MBTPS2O43462 519 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 NRDCO43847 1150 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 KINO60870 393 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GPR32O75388 356 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PSMD10O75832 226 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 FGF18O76093 207 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ZNF205O95201 554 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 FDPSP14324 419 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 IL9P15248 144 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 HOXB8P17481 243 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ENDOUP21128 410 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TRHRP34981 398 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CLCN3P51790 818 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 POLGP54098 1239 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PSMC5P62195 406 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 FAM189BP81408 668 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 KRT17Q04695 432 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM62Q0P6H9 643 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 HYAL1Q12794 435 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PPP2R5CQ13362 524 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 COL9A2Q14055 689 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SMC1AQ14683 1233 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CBX2Q14781 532 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TARBP2Q15633 366 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 DUSP6Q16828 381 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TPD52L1Q16890 204 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CLEC16AQ2KHT3 1053 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 KIZQ2M2Z5 673 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PAN2Q504Q3 1202 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 PPP4R3AQ6IN85 833 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SWSAP1Q6NVH7 229 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 EFCAB12Q6NXP0 572 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GLB1LQ6UWU2 654 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 B3GNT9Q6UX72 402 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SYDE1Q6ZW31 735 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 DPH6Q7L8W6 267 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ECHDC2Q86YB7 292 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SPPL2CQ8IUH8 684 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 HACE1Q8IYU2 909 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 COLGALT1Q8NBJ5 622 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 ETNPPLQ8TBG4 499 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SPPL3Q8TCT6 385 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TBCKQ8TEA7 893 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 POF1BQ8WVV4 589 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TCP11Q8WWU5 503 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 MRPS27Q92552 414 aaKnown RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 CASP10Q92851 521 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 TMEM169Q96HH4 297 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 MSLNLQ96KJ4 702 aa4.64□□□□□ -1.67
VPS13D-206ENST00000476045 FCRL2Q96LA5 508 aaPredicted RBP4.64□□□□□ -1.67
VPS13D-206ENST00000476045 SLC6A18Q96N87 628 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms