RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CACHD1Q5VU97 1274 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 RNF44Q7L0R7 432 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 ZNF280BQ86YH2 543 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 BPIFB1Q8TDL5 484 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 TFAP2BQ92481 460 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 PPP2R3CQ969Q6 453 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 TBCBQ99426 244 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 XPNPEP3Q9NQH7 507 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 ZNF212Q9UDV6 495 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 POM121BA6NF01 834 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 KPNA5O15131 536 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 SLC16A3O15427 465 aaKnown RBP6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 RASAL1O95294 804 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 KRT4P19013 534 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 PRKAR1BP31321 381 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 ALDH9A1P49189 494 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 HNRNPMP52272 730 aaKnown RBP eCLIP6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 FOXI1Q12951 378 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 ARHGEF7Q14155 803 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 ZNF618Q5T7W0 954 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 Q6ZPA2 131 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 UNC13DQ70J99 1090 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 DTX2Q86UW9 622 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 CAGE1Q8TC20 777 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 OSCP1Q8WVF1 389 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 PBKQ96KB5 322 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 SNX22Q96L94 193 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 MRIQ9BWK5 157 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 CXorf36Q9H7Y0 433 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 GLOD4Q9HC38 313 aa6.79□□□□□ -1.32
TM9SF3-204ENST00000475401 RAB27BO00194 218 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 TTLL1O95922 423 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 MT-ND5P03915 603 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 SLPIP03973 132 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ANXA2P07355 339 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 RHOP08100 348 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 IFIT2P09913 472 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 TXNP10599 105 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 SLC5A1P13866 664 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ZFXP17010 805 aaPredicted RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 TPH1P17752 444 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ACVR2AP27037 513 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 PRIM2P49643 509 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 HMGA2P52926 109 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 AK2P54819 239 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ZNF543Q08ER8 600 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 TXNRD1Q16881 649 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 LONRF1Q17RB8 773 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 MAP9Q49MG5 647 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 CERCAMQ5T4B2 595 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 KIAA0895LQ68EN5 471 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 IL31Q6EBC2 164 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 DPP9Q86TI2 863 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 CHFRQ96EP1 664 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ZC3H10Q96K80 434 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 NAA15Q9BXJ9 866 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 CHST8Q9H2A9 424 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 DHX36Q9H2U1 1008 aaKnown RBP6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 SSX2IPQ9Y2D8 614 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 CDY1Q9Y6F8 540 aa6.78□□□□□ -1.32
TM9SF3-204ENST00000475401 ADGRA2Q96PE1 1338 aa6.77□□□□□ -1.32
TM9SF3-204ENST00000475401 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ADM5C9JUS6 153 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ONECUT2O95948 504 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 NR2F6P10588 404 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 KCNA3P22001 575 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 IL1R2P27930 398 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ADRA1BP35368 520 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 GRIA3P42263 894 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 STT3AP46977 705 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 PTDSS1P48651 473 aaKnown RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 CPT1AP50416 773 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ZNF169Q14929 603 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 DEPDC1Q5TB30 811 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ZDHHC24Q6UX98 284 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 GRASPQ7Z6J2 395 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 LIX1LQ8IVB5 337 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ATP11CQ8NB49 1132 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 ATG4AQ8WYN0 398 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 FAM83DQ9H4H8 585 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 STARD7Q9NQZ5 370 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 RGS17Q9UGC6 210 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 MID2Q9UJV3 735 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 CCNL1Q9UK58 526 aaPredicted RBP6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 PADI4Q9UM07 663 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
TM9SF3-204ENST00000475401 F8W8V4 182 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 H7C4K7 107 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 SRGAP2O75044 1071 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 PIAS2O75928 621 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 NDUFB7P17568 137 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 MTHFSP49914 203 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 CASP5P51878 434 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 NEK3P51956 506 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 CCNIQ14094 377 aa6.76□□□□□ -1.33
TM9SF3-204ENST00000475401 ZIK1Q3SY52 487 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms