RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 LINC00597Q9H2U6 94 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 ST6GALNAC4Q9H4F1 302 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 SNX9Q9Y5X1 595 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 IGF2RP11717 2491 aa21.95■■□□□ 1.1
VPS36-203ENST00000475375 BCKDHBP21953 392 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 PCSK1P29120 753 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 ADSSP30520 456 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 LONP1P36776 959 aaKnown RBP21.94■■□□□ 1.1
VPS36-203ENST00000475375 ZNF720Q7Z2F6 126 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 ADGRF2Q8IZF7 708 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 C1orf127Q8N9H9 656 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 PIGKQ92643 395 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 HVCN1Q96D96 273 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 SAAL1Q96ER3 474 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 KIF2CQ99661 725 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 ADAM33Q9BZ11 813 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 MRPL44Q9H9J2 332 aaKnown RBP21.94■■□□□ 1.1
VPS36-203ENST00000475375 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 GCNT4Q9P109 453 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 EXOC7Q9UPT5 735 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 ABCA7Q8IZY2 2146 aa21.94■■□□□ 1.1
VPS36-203ENST00000475375 CEACAM1P13688 526 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 ATRXP46100 2492 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 WNT7BP56706 349 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 GRIN1Q05586 938 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 OSTM1Q86WC4 334 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 ASPMQ8IZT6 3477 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 LRRC52Q8N7C0 313 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 FAM84AQ96KN4 292 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 CNOT6LQ96LI5 555 aaKnown RBP21.93■■□□□ 1.1
VPS36-203ENST00000475375 RBAKQ9NYW8 714 aaPredicted RBP21.93■■□□□ 1.1
VPS36-203ENST00000475375 R3HCC1Q9Y3T6 440 aaKnown RBP21.93■■□□□ 1.1
VPS36-203ENST00000475375 SPEGQ15772 3267 aa21.93■■□□□ 1.1
VPS36-203ENST00000475375 K7EQS6 105 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 MAP3K13O43283 966 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 HCRTO43612 131 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 ALDH1A2O94788 518 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 TOP3BO95985 862 aaKnown RBP21.92■■□□□ 1.1
VPS36-203ENST00000475375 CSRP1P21291 193 aaKnown RBP21.92■■□□□ 1.1
VPS36-203ENST00000475375 GJB2P29033 226 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 DDIT3P35638 169 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 LHX1P48742 406 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 PDE6CP51160 858 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 IRX4P78413 519 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 CFAP221Q4G0U5 840 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 RASSF3Q86WH2 238 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 BRSK2Q8IWQ3 736 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 ZSWIM2Q8NEG5 633 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 DEFB124Q8NES8 71 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 MDGA1Q8NFP4 955 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 FUBP3Q96I24 572 aaKnown RBP eCLIP21.92■■□□□ 1.1
VPS36-203ENST00000475375 ACCSQ96QU6 501 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 PKMYT1Q99640 499 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 TBC1D7Q9P0N9 293 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 ITGA11Q9UKX5 1188 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 MMP17Q9ULZ9 603 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 ARHGAP26Q9UNA1 814 aa21.92■■□□□ 1.1
VPS36-203ENST00000475375 CDX4O14627 284 aaPredicted RBP21.91■■□□□ 1.1
VPS36-203ENST00000475375 BMP15O95972 392 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 OPRD1P41143 372 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 RBP5P82980 135 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 KCNA1Q09470 495 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 CRY1Q16526 586 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 C4orf50Q6ZRC1 276 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 SYCP3Q8IZU3 236 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 TOP6BLQ8N6T0 577 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 KDF1Q8NAX2 398 aaPredicted RBP21.91■■□□□ 1.1
VPS36-203ENST00000475375 GDAP2Q9NXN4 497 aa21.91■■□□□ 1.1
VPS36-203ENST00000475375 MAGEC2Q9UBF1 373 aaPredicted RBP21.91■■□□□ 1.1
VPS36-203ENST00000475375 NUP205Q92621 2012 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 THADAQ6YHU6 1953 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 GOLGA8IPA6NC78 632 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 ANTXRLA6NF34 631 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 MYMKA6NI61 221 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 GOLGA8JA6NMD2 632 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 TMEM191BP0C7N4 346 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 MAGEA11P43364 429 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 MAPK8P45983 427 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 PSMC1P62191 440 aaKnown RBP21.9■■□□□ 1.1
VPS36-203ENST00000475375 SCARA3Q6AZY7 606 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 ARMCX6Q7L4S7 300 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 LPCAT2Q7L5N7 544 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 SPATA18Q8TC71 538 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 RLN3Q8WXF3 142 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 SPACA7Q96KW9 195 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 SCNM1Q9BWG6 230 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 NUSAP1Q9BXS6 441 aaKnown RBP21.9■■□□□ 1.1
VPS36-203ENST00000475375 TRPM5Q9NZQ8 1165 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 BCCIPQ9P287 314 aaKnown RBP eCLIP21.9■■□□□ 1.1
VPS36-203ENST00000475375 MYO16Q9Y6X6 1858 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 KIAA1549LQ6ZVL6 1849 aa21.9■■□□□ 1.1
VPS36-203ENST00000475375 BAHCC1Q9P281 2608 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 TMEM8BA6NDV4 472 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 LEFTY2O00292 366 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 ATP2C2O75185 946 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 GCNT3O95395 438 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 LDHAP00338 332 aaKnown RBP21.89■■□□□ 1.09
VPS36-203ENST00000475375 TCF3P15923 654 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 ANXA13P27216 316 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 GRIK1P39086 918 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms