RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 TDRD10Q5VZ19 366 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 MAML2Q8IZL2 1156 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 ZNF687Q8N1G0 1237 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 FAM3CQ92520 227 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 MYLPFQ96A32 169 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 CCDC47Q96A33 483 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 SYAP1Q96A49 352 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 SNX25Q9H3E2 840 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 MAGEC2Q9UBF1 373 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
SSR1-205ENST00000475213 MYH10P35580 1976 aa13.09□□□□□ -0.31
SSR1-205ENST00000475213 PRR23AA6NEV1 266 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 TADA3O75528 432 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 VNN1O95497 513 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 C4BPAP04003 597 aaKnown RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 SP9P0CG40 484 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 BDNFP23560 247 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.326e-8■□□□□ 9.2
SSR1-205ENST00000475213 RPS9P46781 194 aaKnown RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 MLLT6P55198 1093 aaPredicted RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 DLG4P78352 724 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 CYP27A1Q02318 531 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 BIRC3Q13489 604 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 KCNB1Q14721 858 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 ARHGAP29Q52LW3 1261 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 MDH1BQ5I0G3 518 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 MYCBPAPQ8TBZ2 947 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 BPIFB1Q8TDL5 484 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 NKD2Q969F2 451 aaPredicted RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 NXF1Q9UBU9 619 aaKnown RBP13.08□□□□□ -0.32
SSR1-205ENST00000475213 MAPK8IP1Q9UQF2 711 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 TRAF3IP3Q9Y228 551 aa13.08□□□□□ -0.32
SSR1-205ENST00000475213 HELZP42694 1942 aaKnown RBP13.07□□□□□ -0.32
SSR1-205ENST00000475213 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 KIF20AO95235 890 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 PTPN1P18031 435 aaKnown RBP13.07□□□□□ -0.32
SSR1-205ENST00000475213 CCNE1P24864 410 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 AVPR1AP37288 418 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 GRIK1P39086 918 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 SOX9P48436 509 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
SSR1-205ENST00000475213 NUCB2P80303 420 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 NCOA4Q13772 614 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 NFIL3Q16649 462 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 CEP135Q66GS9 1140 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 VSTM1Q6UX27 236 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 TTC8Q8TAM2 541 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 USP13Q92995 863 aaPredicted RBP13.07□□□□□ -0.32
SSR1-205ENST00000475213 ELMO3Q96BJ8 720 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 SPATA17Q96L03 361 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 C8orf33Q9H7E9 229 aaPredicted RBP13.07□□□□□ -0.32
SSR1-205ENST00000475213 GTSE1Q9NYZ3 720 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 CCL26Q9Y258 94 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 FRMD4BQ9Y2L6 1034 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 R4GN57 208 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 FRYLO94915 3013 aa13.07□□□□□ -0.32
SSR1-205ENST00000475213 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 A8MXQ7 604 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 TRIM66O15016 1216 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 LAMTOR5O43504 91 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 CLSTN1O94985 981 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 NR2F2P24468 414 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 CDH8P55286 799 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 TNK2Q07912 1038 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 ZACNQ401N2 412 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 ZNF667Q5HYK9 610 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 C1orf220Q5T0J3 134 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 FMR1NBQ8N0W7 255 aaPredicted RBP13.06□□□□□ -0.32
SSR1-205ENST00000475213 GUF1Q8N442 669 aaKnown RBP13.06□□□□□ -0.32
SSR1-205ENST00000475213 B3GALNT2Q8NCR0 500 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 MSANTD3Q96H12 275 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 LMAN1LQ9HAT1 526 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 TDP1Q9NUW8 608 aa13.06□□□□□ -0.32
SSR1-205ENST00000475213 THG1LQ9NWX6 298 aaKnown RBP13.06□□□□□ -0.32
SSR1-205ENST00000475213 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms