RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 CPA6Q8N4T0 437 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 GLIS3Q8NEA6 775 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 OSCP1Q8WVF1 389 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 FUBP3Q96I24 572 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL2A1-205ENST00000474996 ANKRD36BP1Q96IX9 119 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 HHIPQ96QV1 700 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 INTS13Q9NVM9 706 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
COL2A1-205ENST00000474996 PTPRDP23468 1912 aa15.39■□□□□ 0.05
COL2A1-205ENST00000474996 CNOT1A5YKK6 2376 aaKnown RBP15.38■□□□□ 0.05
COL2A1-205ENST00000474996 C2orf78A6NCI8 922 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 EPN2O95208 641 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 KCNA4P22459 653 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 LMO2P25791 158 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 RAP1GAPP47736 663 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 IFNAR2P48551 515 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 SLC39A14Q15043 492 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 FBXO43Q4G163 708 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 CBWD2Q8IUF1 395 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 CAMKK1Q8N5S9 505 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 ARL14EPQ8N8R7 260 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-205ENST00000474996 FSIP1Q8NA03 581 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 C12orf50Q8NA57 414 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-205ENST00000474996 RPLP0P6Q8NHW5 317 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 KBTBD7Q8WVZ9 684 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 EZH1Q92800 747 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-205ENST00000474996 ATP2A3Q93084 1043 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 HPS3Q969F9 1004 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 MYLPFQ96A32 169 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 LOXL4Q96JB6 756 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 SYT15Q9BQS2 421 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 GCNT4Q9P109 453 aa15.38■□□□□ 0.05
COL2A1-205ENST00000474996 MORC2Q9Y6X9 1032 aaPredicted RBP15.38■□□□□ 0.05
COL2A1-205ENST00000474996 ZNF233A6NK53 670 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 KIAA0391O15091 583 aaKnown RBP15.37■□□□□ 0.05
COL2A1-205ENST00000474996 TNNC2P02585 160 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 ZNF806P0C7X5 589 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 MAGEA11P43364 429 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 PSMD2Q13200 908 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 KCNB1Q14721 858 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 EML3Q32P44 896 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 LIMS2Q7Z4I7 341 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 SH3RF2Q8TEC5 729 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 CD101Q93033 1021 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 EXOC4Q96A65 974 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 CRTAC1Q9NQ79 661 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 RXFP3Q9NSD7 469 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 MAGEC2Q9UBF1 373 aaPredicted RBP15.37■□□□□ 0.05
COL2A1-205ENST00000474996 CDH9Q9ULB4 789 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
COL2A1-205ENST00000474996 AKAP3O75969 853 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 PDGFRBP09619 1106 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 HDCP19113 662 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 BDNFP23560 247 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 GRIK1P39086 918 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 CYP27A1Q02318 531 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 SURF1Q15526 300 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 DUOXA2Q1HG44 320 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 IL31Q6EBC2 164 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 SYT13Q7L8C5 426 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 SPATA17Q96L03 361 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 MMS19Q96T76 1030 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 LINC00597Q9H2U6 94 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 FOXD4L1Q9NU39 408 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 HSPBP1Q9NZL4 362 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 ARHGAP26Q9UNA1 814 aa15.36■□□□□ 0.05
COL2A1-205ENST00000474996 WARSP23381 471 aaKnown RBP15.35■□□□□ 0.05
COL2A1-205ENST00000474996 HOXD13P35453 343 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 LIMK1P53667 647 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 USP46P62068 366 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 DMC1Q14565 340 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 MAPRE1Q15691 268 aaKnown RBP15.35■□□□□ 0.05
COL2A1-205ENST00000474996 PLK5Q496M5 336 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 VSTM1Q6UX27 236 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 WDR49Q8IV35 697 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 DDX1Q92499 740 aaKnown RBP15.35■□□□□ 0.05
COL2A1-205ENST00000474996 PCED1BQ96HM7 432 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 ZC3H10Q96K80 434 aaKnown RBP15.35■□□□□ 0.05
COL2A1-205ENST00000474996 TNMDQ9H2S6 317 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 PCDHGA5Q9Y5G8 931 aa15.35■□□□□ 0.05
COL2A1-205ENST00000474996 MAP1BP46821 2468 aaKnown RBP15.35■□□□□ 0.05
COL2A1-205ENST00000474996 KMT2BQ9UMN6 2715 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 DCLK1O15075 740 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 KRT37O76014 449 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 APBB3O95704 486 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 TCF3P15923 654 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 ANXA13P27216 316 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 MPLP40238 635 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 NASPP49321 788 aaPredicted RBP15.34■□□□□ 0.05
COL2A1-205ENST00000474996 ZXDBP98169 803 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 NR1H3Q13133 447 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 STK38Q15208 465 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 E2F4Q16254 413 aa15.34■□□□□ 0.05
COL2A1-205ENST00000474996 PLA2G2CQ5R387 149 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms