RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 AKAP3O75969 853 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 HMGA1P17096 107 aaKnown RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 CYP2F1P24903 491 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 SOX9P48436 509 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 VAMP7P51809 220 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 AP3M2P53677 418 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 CYP4F8P98187 520 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 SMARCB1Q12824 385 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 TAF12Q16514 161 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 DDR2Q16832 855 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 SOWAHAQ2M3V2 549 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 ZSCAN23Q3MJ62 389 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 TTI2Q6NXR4 508 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 TMEM150AQ86TG1 271 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 OSTM1Q86WC4 334 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 WDR49Q8IV35 697 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 YAF2Q8IY57 180 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 STKLD1Q8NE28 680 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 C2orf15Q8WU43 125 aaKnown RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 E2F7Q96AV8 911 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 ZNF560Q96MR9 790 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 GZF1Q9H116 711 aaPredicted RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 TASP1Q9H6P5 420 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 INTS13Q9NVM9 706 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 DDX43Q9NXZ2 648 aaKnown RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 ARMCX3Q9UH62 379 aaPredicted RBP12.67□□□□□ -0.38
CLIP2-204ENST00000474962 FBXO4Q9UKT5 387 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 PCDHB5Q9Y5E4 795 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 SNX9Q9Y5X1 595 aa12.67□□□□□ -0.38
CLIP2-204ENST00000474962 MYBPHLA2RUH7 354 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 BECN2A8MW95 431 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 DPYSL4O14531 572 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 CHADO15335 359 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 ATP2C2O75185 946 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 FGF19O95750 216 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 LMO2P25791 158 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 TSPY1Q01534 308 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 BIRC3Q13489 604 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 TRPC3Q13507 836 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 VEPH1Q14D04 833 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 ARHGAP15Q53QZ3 475 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 DCLK2Q8N568 766 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 TMC2Q8TDI7 906 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 DUSP9Q99956 384 aaKnown RBP12.66□□□□□ -0.38
CLIP2-204ENST00000474962 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
CLIP2-204ENST00000474962 SMTNL1A8MU46 457 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 GABRDO14764 452 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 IKBKBO14920 756 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 CAVIN2O95810 425 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 CST3P01034 146 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 F11P03951 625 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 CHRNB1P11230 501 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 MAGEA9P43362 315 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 KPNA1P52294 538 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 TNK2Q07912 1038 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 GSE1Q14687 1217 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 DCAF17Q5H9S7 520 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 TXNDC8Q6A555 127 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 ZC3H14Q6PJT7 736 aaKnown RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 TXNDC11Q6PKC3 985 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 MAB21L3Q8N8X9 362 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 ENOX1Q8TC92 643 aaKnown RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 CSGALNACT1Q8TDX6 532 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 PARD3BQ8TEW8 1205 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 ATRIPQ8WXE1 791 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 PKMYT1Q99640 499 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 MMRN2Q9H8L6 949 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 MAGED2Q9UNF1 606 aaPredicted RBP12.65□□□□□ -0.38
CLIP2-204ENST00000474962 CCL26Q9Y258 94 aa12.65□□□□□ -0.38
CLIP2-204ENST00000474962 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.39
CLIP2-204ENST00000474962 MIA3Q5JRA6 1907 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 LRRIQ3A6PVS8 624 aaPredicted RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 TPM2P07951 284 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 PDGFRBP09619 1106 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CDK11BP21127 795 aaKnown RBP12.64□□□□□ -0.39
CLIP2-204ENST00000474962 WEE1P30291 646 aa12.64□□□□□ -0.39
CLIP2-204ENST00000474962 CDC25CP30307 473 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms