RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
SRRT-209ENST00000474896 GARTP22102 1010 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 MPLP40238 635 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 IFNAR2P48551 515 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 LHX1P48742 406 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 ZNF77Q15935 545 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 SYT13Q7L8C5 426 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 ARL14EPQ8N8R7 260 aaPredicted RBP16.75■□□□□ 0.27
SRRT-209ENST00000474896 FSIP1Q8NA03 581 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 EZH1Q92800 747 aaPredicted RBP16.75■□□□□ 0.27
SRRT-209ENST00000474896 ATP2A3Q93084 1043 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 CLIC6Q96NY7 704 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 DUSP15Q9H1R2 295 aaPredicted RBP16.75■□□□□ 0.27
SRRT-209ENST00000474896 LINC00597Q9H2U6 94 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 PDE11AQ9HCR9 933 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 VPS45Q9NRW7 570 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 ANGPTL2Q9UKU9 493 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 CHD8Q9HCK8 2581 aa16.75■□□□□ 0.27
SRRT-209ENST00000474896 C2orf78A6NCI8 922 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 GABRDO14764 452 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 ATP2C2O75185 946 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 RHOBTB1O94844 696 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 APBB3O95704 486 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 CKMP06732 381 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 IDEP14735 1019 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 PCSK1P29120 753 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 CASP5P51878 434 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 NR1H3Q13133 447 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 DMC1Q14565 340 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 SOWAHAQ2M3V2 549 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 EML3Q32P44 896 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 CFAP221Q4G0U5 840 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 ADGRF2Q8IZF7 708 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 TOP6BLQ8N6T0 577 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 PANK2Q9BZ23 570 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 GCNT4Q9P109 453 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 EBF1Q9UH73 591 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
SRRT-209ENST00000474896 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
SRRT-209ENST00000474896 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
SRRT-209ENST00000474896 HDCP19113 662 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 PMLP29590 882 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 CREB5Q02930 508 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 ELF2Q15723 593 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 RNF43Q68DV7 783 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 TCEAL6Q6IPX3 200 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 SPATA18Q8TC71 538 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 SH3RF2Q8TEC5 729 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 TCEAL3Q969E4 200 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 FUBP3Q96I24 572 aaKnown RBP eCLIP16.73■□□□□ 0.27
SRRT-209ENST00000474896 LSM14BQ9BX40 385 aaKnown RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 MTMR12Q9C0I1 747 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 ZSCAN16Q9H4T2 348 aaPredicted RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 MAGEC2Q9UBF1 373 aaPredicted RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 INVSQ9Y283 1065 aa16.73■□□□□ 0.27
SRRT-209ENST00000474896 R3HCC1Q9Y3T6 440 aaKnown RBP16.73■□□□□ 0.27
SRRT-209ENST00000474896 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
SRRT-209ENST00000474896 KCNK5O95279 499 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 CAVIN2O95810 425 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 F13A1P00488 732 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 TMEM191BP0C7N4 346 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 LMO2P25791 158 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 TXLNAP40222 546 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 MAGEA11P43364 429 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 DGKEP52429 567 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
SRRT-209ENST00000474896 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 USP4Q13107 963 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 KCNB1Q14721 858 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 DPH6Q7L8W6 267 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 ACDQ96AP0 544 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 OLFML3Q9NRN5 406 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 ZDHHC9Q9Y397 364 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 ABCA7Q8IZY2 2146 aa16.72■□□□□ 0.27
SRRT-209ENST00000474896 PDGFRBP09619 1106 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 BDNFP23560 247 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 GBP1P32455 592 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 GRIK1P39086 918 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 PSMC1P62191 440 aaKnown RBP16.71■□□□□ 0.27
SRRT-209ENST00000474896 ALCAMQ13740 583 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 GPD1LQ8N335 351 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 HPDLQ96IR7 371 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 SYT15Q9BQS2 421 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 INTS13Q9NVM9 706 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 CDH9Q9ULB4 789 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 ARHGAP26Q9UNA1 814 aa16.71■□□□□ 0.27
SRRT-209ENST00000474896 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
SRRT-209ENST00000474896 BCLAF3A2AJT9 711 aaKnown RBP16.7■□□□□ 0.26
SRRT-209ENST00000474896 K7EQS6 105 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms