RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 PCMTD1Q96MG8 357 aaPredicted RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 HEXIM2Q96MH2 286 aaKnown RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 HNRNPABQ99729 332 aaKnown RBP16.72■□□□□ 0.27
COL1A1-204ENST00000474644 HCFC1R1Q9NWW0 138 aa16.72■□□□□ 0.27
COL1A1-204ENST00000474644 CLUHO75153 1309 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 TRIM66O15016 1216 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 IL9P15248 144 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 CD19P15391 556 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 RAPGEF1Q13905 1077 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 NR1I3Q14994 352 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 VEPH1Q14D04 833 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 SMAD2Q15796 467 aaKnown RBP16.71■□□□□ 0.27
COL1A1-204ENST00000474644 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-204ENST00000474644 SDHAF4Q5VUM1 108 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 ARHGAP17Q68EM7 881 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 GRASPQ7Z6J2 395 aaPredicted RBP16.71■□□□□ 0.27
COL1A1-204ENST00000474644 GAS2L3Q86XJ1 694 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 STKLD1Q8NE28 680 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 GIPC2Q8TF65 315 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 PSMG2Q969U7 264 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 SMARCD1Q96GM5 515 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 C8orf48Q96LL4 319 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 GPR88Q9GZN0 384 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 POMKQ9H5K3 350 aa16.71■□□□□ 0.27
COL1A1-204ENST00000474644 DNMT3BQ9UBC3 853 aaKnown RBP16.71■□□□□ 0.27
COL1A1-204ENST00000474644 PTPRDP23468 1912 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 F8VP50 259 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 AP1G2O75843 785 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 CALCAP01258 141 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 FAM200BP0CF97 657 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 PNMA6AP0CW24 399 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 VDRP11473 427 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 GRIK1P39086 918 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 UBASH3AP57075 661 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 POLR2FP61218 127 aaKnown RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 NTHL1P78549 312 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 PABPC1LQ4VXU2 614 aaKnown RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 ITIH5Q86UX2 942 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 TFAP2BQ92481 460 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 ZNF512Q96ME7 567 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 ASB2Q96Q27 587 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 CORO1BQ9BR76 489 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 WDR6Q9NNW5 1121 aaKnown RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 DMAP1Q9NPF5 467 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-204ENST00000474644 IFNKQ9P0W0 207 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 FAM50BQ9Y247 325 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 ASB3Q9Y575 518 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 MUC3AQ02505 3323 aa16.7■□□□□ 0.26
COL1A1-204ENST00000474644 C2orf16Q68DN1 1984 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 F8VZ95 297 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 O00370 1275 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 FOXN3O00409 490 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-204ENST00000474644 RHOP08100 348 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 PTPN2P17706 415 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 BRD2P25440 801 aaKnown RBP16.69■□□□□ 0.26
COL1A1-204ENST00000474644 ANXA13P27216 316 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 USP8P40818 1118 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 DRAP1Q14919 205 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-204ENST00000474644 GOLGA7BQ2TAP0 167 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 CLEC20AQ6ZU45 233 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 TMC8Q8IU68 726 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 ZMIZ2Q8NF64 920 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 SPATA17Q96L03 361 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 SMOQ99835 787 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 ZSWIM1Q9BR11 485 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 LRRC3Q9BY71 257 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 STK33Q9BYT3 514 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 RBSNQ9H1K0 784 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 CSNK1G1Q9HCP0 422 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 ZNF334Q9HCZ1 680 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-204ENST00000474644 ASAH2Q9NR71 780 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 TSPAN16Q9UKR8 245 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 KIAA1257Q9ULG3 409 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 DENND4AQ7Z401 1863 aa16.69■□□□□ 0.26
COL1A1-204ENST00000474644 SLC38A8A6NNN8 435 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 BEST1O76090 585 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
COL1A1-204ENST00000474644 NPR3P17342 541 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 PBX1P40424 430 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 EPHA5P54756 1037 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 MAP3K7CLP57077 242 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 MTMR3Q13615 1198 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 SLC5A9Q2M3M2 681 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 DNAJB7Q7Z6W7 309 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-204ENST00000474644 TTC30AQ86WT1 665 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 FAM71AQ8IYT1 594 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 HS6ST3Q8IZP7 471 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 CEP295NLQ96MC4 621 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 ANP32EQ9BTT0 268 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 XPO4Q9C0E2 1151 aaKnown RBP16.68■□□□□ 0.26
COL1A1-204ENST00000474644 ACP6Q9NPH0 428 aa16.68■□□□□ 0.26
COL1A1-204ENST00000474644 NLRC4Q9NPP4 1024 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms