RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 CDY1Q9Y6F8 540 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 SCINQ9Y6U3 715 aa10.94□□□□□ -0.66
COL12A1-206ENST00000474564 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 LCHNA4D1U4 455 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 SPDYE4A6NLX3 237 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 GRXCR1A8MXD5 290 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 PRRG1O14668 218 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 XPO1O14980 1071 aaKnown RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 KIF5CO60282 957 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TUBB4AP04350 444 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CYP1A1P04798 512 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM253P0C7T8 217 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TNNT1P13805 278 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CHRNB2P17787 502 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 BDNFP23560 247 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 IGFBP6P24592 240 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 DNAJB2P25686 324 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CDH5P33151 784 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CENPCQ03188 943 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 PLD1Q13393 1074 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 VEPH1Q14D04 833 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ASTE1Q2TB18 679 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 MGAT5BQ3V5L5 792 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CFAP221Q4G0U5 840 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 SLC8B1Q6J4K2 584 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 DENND1BQ6P3S1 775 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 PRSS55Q6UWB4 352 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CCDC149Q6ZUS6 474 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TOGARAM2Q6ZUX3 1019 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TAS1R1Q7RTX1 841 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TMEM173Q86WV6 379 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 PHF13Q86YI8 300 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 SCN4BQ8IWT1 228 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ZNF461Q8TAF7 563 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 UBE2Q2Q8WVN8 375 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 POF1BQ8WVV4 589 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 SECISBP2LQ93073 1101 aaKnown RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 TIFAQ96CG3 184 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ZNF653Q96CK0 615 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 B3GALT6Q96L58 329 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 B3GNT5Q9BYG0 378 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ISCUQ9H1K1 167 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 NKX2-4Q9H2Z4 354 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
COL12A1-206ENST00000474564 CRTAC1Q9NQ79 661 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 KRT82Q9NSB4 513 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 PARVAQ9NVD7 372 aa10.93□□□□□ -0.66
COL12A1-206ENST00000474564 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 H3BNC9 293 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 FBXO21O94952 628 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 C1RP00736 705 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 UNGP13051 313 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ABCB4P21439 1286 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MAGEA11P43364 429 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 GALCP54803 685 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MAP3K7CLP57077 242 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 NOMO3P69849 1222 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 PDE4CQ08493 712 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 RAB33AQ14088 237 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ZNF268Q14587 947 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MTF1Q14872 753 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 DCUN1D2Q6PH85 259 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 CHRDL2Q6WN34 429 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 RTL10Q7L3V2 364 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 RNF168Q8IYW5 571 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MCOLN2Q8IZK6 566 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 FUKQ8N0W3 1084 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ELMOD1Q8N336 334 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 RNF10Q8N5U6 811 aaKnown RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MRPL43Q8N983 215 aaKnown RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 C1orf131Q8NDD1 294 aaKnown RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ACRBPQ8NEB7 543 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 OR10T2Q8NGX3 314 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 SPPL3Q8TCT6 385 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 BCL7CQ8WUZ0 217 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ALS2CR12Q96Q35 445 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 PCDHB18PQ96TA0 734 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 SYT11Q9BT88 431 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 SELENOOQ9BVL4 669 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 PBX4Q9BYU1 374 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 FBXO44Q9H4M3 255 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 PNPLA8Q9NP80 782 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 LZTFL1Q9NQ48 299 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 COMMD8Q9NX08 183 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 CTTNBP2NLQ9P2B4 639 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 MYO1AQ9UBC5 1043 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 AFF4Q9UHB7 1163 aaKnown RBP10.92□□□□□ -0.66
COL12A1-206ENST00000474564 IRAK3Q9Y616 596 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 SCN1AP35498 2009 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 CENPFP49454 3210 aa10.92□□□□□ -0.66
COL12A1-206ENST00000474564 CLDN5O00501 218 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms