RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ADAM19Q9H013 955 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 LHX5Q9H2C1 402 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 DDX4Q9NQI0 724 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 DNAJB9Q9UBS3 223 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CPSF3Q9UKF6 684 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 KIAA1024Q9UPX6 916 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 PCDHGA1Q9Y5H4 931 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 COMMD3-BMI1R4GMX3 469 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 MAP3K5Q99683 1374 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 HSBP1L1C9JCN9 74 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 GPR171O14626 319 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 HGSO14964 777 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 STX10O60499 249 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SERPINB7O75635 380 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CDC123O75794 336 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 GNA14O95837 355 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 IFNA14P01570 189 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ITGB8P26012 769 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 RXRBP28702 533 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 IARSP41252 1262 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 KCNJ5P48544 419 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ZNF135P52742 658 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 RNF4P78317 190 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ZNF33BQ06732 778 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 GRB10Q13322 594 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 AUHQ13825 339 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 BLMHQ13867 455 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SURF1Q15526 300 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SGO1Q5FBB7 561 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 FAM122CQ6P4D5 195 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 KIF6Q6ZMV9 814 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SESTD1Q86VW0 696 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 FAM228AQ86W67 206 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 MPP5Q8N3R9 675 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ATP6V0BQ99437 205 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 RBM4BQ9BQ04 359 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 RBM4Q9BWF3 364 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 C1orf21Q9H246 121 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SUCOQ9UBS9 1254 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 TINAGQ9UJW2 476 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 TLK1Q9UKI8 766 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 INVSQ9Y283 1065 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 STON1Q9Y6Q2 735 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 PPIP5K1Q6PFW1 1433 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 A0A087X0M5 115 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 A0A1B0GX30 115 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 NUDT19A8MXV4 375 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 NDUFS8O00217 210 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 UBE2CO00762 179 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 DVL2O14641 736 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 TLL1O43897 1013 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CIAO1O76071 339 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SCAF4O95104 1147 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 PRAMEF12O95522 483 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ANXA6P08133 673 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 HNRNPLP14866 589 aaKnown RBP eCLIP3.66□□□□□ -1.823e-8■■■□□ 16.7
UBR3-208ENST00000474426 EZRP15311 586 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 CRABP2P29373 138 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ALDH4A1P30038 563 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 SLC5A2P31639 672 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 LMAN1P49257 510 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 TFCP2Q12800 502 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 NNTQ13423 1086 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 PON2Q15165 354 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CTC1Q2NKJ3 1217 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 METTL21CQ5VZV1 264 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 RSBN1LQ6PCB5 846 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 PRR23CQ6ZRP0 262 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 MTDHQ86UE4 582 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 ANKLE2Q86XL3 938 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 PLEKHM2Q8IWE5 1019 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 DNAJC10Q8IXB1 793 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 FANCBQ8NB91 859 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 GLIS1Q8NBF1 620 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 RAB3IL1Q8TBN0 382 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CREB3L4Q8TEY5 395 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 TANKQ92844 425 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ZNF669Q96BR6 464 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 CEP170P1Q96L14 293 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CEP19Q96LK0 163 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CCDC77Q9BR77 488 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 RBM42Q9BTD8 480 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 DHRS4Q9BTZ2 278 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 FHDC1Q9C0D6 1143 aaPredicted RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 KCNH6Q9H252 994 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 MRPL47Q9HD33 250 aaKnown RBP3.66□□□□□ -1.82
UBR3-208ENST00000474426 TUFT1Q9NNX1 390 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 CNGB3Q9NQW8 809 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 IL19Q9UHD0 177 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 VPS51Q9UID3 782 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 PCDHA7Q9UN72 937 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 MTMR6Q9Y217 621 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 POLHQ9Y253 713 aa3.66□□□□□ -1.82
UBR3-208ENST00000474426 ZSCAN5BA6NJL1 495 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 PER2O15055 1255 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 DYNC1LI2O43237 492 aaPredicted RBP3.65□□□□□ -1.82
UBR3-208ENST00000474426 PI15O43692 258 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 ST18O60284 1047 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 SEMA3DO95025 777 aa3.65□□□□□ -1.82
UBR3-208ENST00000474426 CCNDBP1O95273 360 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms