RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SETSIPP0DME0 302 aa8.82□□□□□ -1
CNN3-205ENST00000474409 BDNFP23560 247 aa8.82□□□□□ -1
CNN3-205ENST00000474409 DNAJB1P25685 340 aa8.82□□□□□ -1
CNN3-205ENST00000474409 ERVFC1P60507 584 aa8.82□□□□□ -1
CNN3-205ENST00000474409 NOMO3P69849 1222 aa8.82□□□□□ -1
CNN3-205ENST00000474409 CENPCQ03188 943 aa8.82□□□□□ -1
CNN3-205ENST00000474409 GPR17Q13304 367 aa8.82□□□□□ -1
CNN3-205ENST00000474409 CLEC16AQ2KHT3 1053 aa8.82□□□□□ -1
CNN3-205ENST00000474409 MGAT5BQ3V5L5 792 aa8.82□□□□□ -1
CNN3-205ENST00000474409 CCDC122Q5T0U0 273 aa8.82□□□□□ -1
CNN3-205ENST00000474409 PRPF38BQ5VTL8 546 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 DENND1BQ6P3S1 775 aa8.82□□□□□ -1
CNN3-205ENST00000474409 ALKBH5Q6P6C2 394 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 RSPO2Q6UXX9 243 aaPredicted RBP8.82□□□□□ -1
CNN3-205ENST00000474409 KIAA1328Q86T90 577 aa8.82□□□□□ -1
CNN3-205ENST00000474409 LRRTM3Q86VH5 581 aa8.82□□□□□ -1
CNN3-205ENST00000474409 TTC30AQ86WT1 665 aa8.82□□□□□ -1
CNN3-205ENST00000474409 PALB2Q86YC2 1186 aa8.82□□□□□ -1
CNN3-205ENST00000474409 GPR65Q8IYL9 337 aa8.82□□□□□ -1
CNN3-205ENST00000474409 TXLNBQ8N3L3 684 aa8.82□□□□□ -1
CNN3-205ENST00000474409 ANKRD52Q8NB46 1076 aa8.82□□□□□ -1
CNN3-205ENST00000474409 ACRBPQ8NEB7 543 aa8.82□□□□□ -1
CNN3-205ENST00000474409 UBA3Q8TBC4 463 aa8.82□□□□□ -1
CNN3-205ENST00000474409 C2orf15Q8WU43 125 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 FUBP3Q96I24 572 aaKnown RBP eCLIP8.82□□□□□ -1
CNN3-205ENST00000474409 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 SEPT5Q99719 369 aaPredicted RBP8.82□□□□□ -1
CNN3-205ENST00000474409 CLSTN3Q9BQT9 956 aa8.82□□□□□ -1
CNN3-205ENST00000474409 ZSWIM1Q9BR11 485 aa8.82□□□□□ -1
CNN3-205ENST00000474409 C11orf70Q9BRQ4 267 aa8.82□□□□□ -1
CNN3-205ENST00000474409 DESI2Q9BSY9 194 aa8.82□□□□□ -1
CNN3-205ENST00000474409 SYT11Q9BT88 431 aa8.82□□□□□ -1
CNN3-205ENST00000474409 RHOBTB2Q9BYZ6 727 aa8.82□□□□□ -1
CNN3-205ENST00000474409 LMAN2LQ9H0V9 348 aa8.82□□□□□ -1
CNN3-205ENST00000474409 NGRNQ9NPE2 291 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 DMAP1Q9NPF5 467 aaPredicted RBP8.82□□□□□ -1
CNN3-205ENST00000474409 ST7Q9NRC1 585 aa8.82□□□□□ -1
CNN3-205ENST00000474409 FNIP2Q9P278 1114 aa8.82□□□□□ -1
CNN3-205ENST00000474409 NAGPAQ9UK23 515 aa8.82□□□□□ -1
CNN3-205ENST00000474409 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
CNN3-205ENST00000474409 EPN1Q9Y6I3 576 aaPredicted RBP8.82□□□□□ -1
CNN3-205ENST00000474409 SHROOM3Q8TF72 1996 aa8.82□□□□□ -1
CNN3-205ENST00000474409 RANBP2P49792 3224 aaKnown RBP8.82□□□□□ -1
CNN3-205ENST00000474409 PRRG1O14668 218 aa8.81□□□□□ -1
CNN3-205ENST00000474409 FSCN2O14926 492 aa8.81□□□□□ -1
CNN3-205ENST00000474409 XPO1O14980 1071 aaKnown RBP8.81□□□□□ -1
CNN3-205ENST00000474409 TRIM66O15016 1216 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ADAM12O43184 909 aa8.81□□□□□ -1
CNN3-205ENST00000474409 TBC1D4O60343 1298 aa8.81□□□□□ -1
CNN3-205ENST00000474409 RTN2O75298 545 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CXCL14O95715 111 aa8.81□□□□□ -1
CNN3-205ENST00000474409 GLUD1P00367 558 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CYP1A1P04798 512 aaPredicted RBP8.81□□□□□ -1
CNN3-205ENST00000474409 CALB1P05937 261 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CNPP09543 421 aaKnown RBP8.81□□□□□ -1
CNN3-205ENST00000474409 CCDC175P0C221 793 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ABCB4P21439 1286 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CYP2F1P24903 491 aa8.81□□□□□ -1
CNN3-205ENST00000474409 KLRC2P26717 231 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ELF1P32519 619 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CDH5P33151 784 aaPredicted RBP8.81□□□□□ -1
CNN3-205ENST00000474409 GRIK1P39086 918 aa8.81□□□□□ -1
CNN3-205ENST00000474409 MAGEA1P43355 309 aa8.81□□□□□ -1
CNN3-205ENST00000474409 MAP3K7CLP57077 242 aa8.81□□□□□ -1
CNN3-205ENST00000474409 KRT83P78385 493 aa8.81□□□□□ -1
CNN3-205ENST00000474409 PDE4CQ08493 712 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ADCY1Q08828 1119 aa8.81□□□□□ -1
CNN3-205ENST00000474409 PDCLQ13371 301 aa8.81□□□□□ -1
CNN3-205ENST00000474409 PTPROQ16827 1216 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ASTE1Q2TB18 679 aaPredicted RBP8.81□□□□□ -1
CNN3-205ENST00000474409 LRIT3Q3SXY7 679 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CFAP221Q4G0U5 840 aa8.81□□□□□ -1
CNN3-205ENST00000474409 HS1BP3Q53T59 392 aa8.81□□□□□ -1
CNN3-205ENST00000474409 TPGS2Q68CL5 300 aa8.81□□□□□ -1
CNN3-205ENST00000474409 PDE12Q6L8Q7 609 aaKnown RBP8.81□□□□□ -1
CNN3-205ENST00000474409 VSTM1Q6UX27 236 aa8.81□□□□□ -1
CNN3-205ENST00000474409 RNF19BQ6ZMZ0 732 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CLEC20AQ6ZU45 233 aa8.81□□□□□ -1
CNN3-205ENST00000474409 TOGARAM2Q6ZUX3 1019 aa8.81□□□□□ -1
CNN3-205ENST00000474409 SCN4BQ8IWT1 228 aa8.81□□□□□ -1
CNN3-205ENST00000474409 SLC30A5Q8TAD4 765 aa8.81□□□□□ -1
CNN3-205ENST00000474409 OLIG1Q8TAK6 271 aa8.81□□□□□ -1
CNN3-205ENST00000474409 CPA5Q8WXQ8 436 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ZNF653Q96CK0 615 aa8.81□□□□□ -1
CNN3-205ENST00000474409 TRIM11Q96F44 468 aa8.81□□□□□ -1
CNN3-205ENST00000474409 PCDHB18PQ96TA0 734 aa8.81□□□□□ -1
CNN3-205ENST00000474409 DUSP16Q9BY84 665 aa8.81□□□□□ -1
CNN3-205ENST00000474409 LHX5Q9H2C1 402 aa8.81□□□□□ -1
CNN3-205ENST00000474409 RXFP1Q9HBX9 757 aa8.81□□□□□ -1
CNN3-205ENST00000474409 ABCB6Q9NP58 842 aa8.81□□□□□ -1
CNN3-205ENST00000474409 TAS2R14Q9NYV8 317 aa8.81□□□□□ -1
CNN3-205ENST00000474409 AFF4Q9UHB7 1163 aaKnown RBP8.81□□□□□ -1
CNN3-205ENST00000474409 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
CNN3-205ENST00000474409 C2orf71A6NGG8 1288 aa8.8□□□□□ -1
CNN3-205ENST00000474409 EPOPA6NHQ4 379 aa8.8□□□□□ -1
CNN3-205ENST00000474409 SPDYE4A6NLX3 237 aa8.8□□□□□ -1
CNN3-205ENST00000474409 HIDE1A8MVS5 230 aa8.8□□□□□ -1
CNN3-205ENST00000474409 F8VP50 259 aa8.8□□□□□ -1
CNN3-205ENST00000474409 ATMINO43313 823 aaPredicted RBP8.8□□□□□ -1
CNN3-205ENST00000474409 LCA5LO95447 670 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms