RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 VWA3BQ502W6 1294 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 TCP11X2Q5H9J9 407 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 PRSS36Q5K4E3 855 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
USF1-205ENST00000473969 DENND5BQ6ZUT9 1274 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 FAM35AQ86V20 835 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 C12orf29Q8N999 325 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 SHKBP1Q8TBC3 707 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 SLC2A14Q8TDB8 520 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 MRPS31Q92665 395 aaKnown RBP14.6□□□□□ -0.07
USF1-205ENST00000473969 CRACR2AQ9BSW2 395 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 NDST4Q9H3R1 872 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 KCNK12Q9HB15 430 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 DMAP1Q9NPF5 467 aaPredicted RBP14.6□□□□□ -0.07
USF1-205ENST00000473969 HMGXB4Q9UGU5 601 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 PCDHB4Q9Y5E5 795 aa14.6□□□□□ -0.07
USF1-205ENST00000473969 GTPBP10A4D1E9 387 aaKnown RBP14.59□□□□□ -0.07
USF1-205ENST00000473969 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 DPYSL4O14531 572 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 NOL4O94818 638 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 FAM200BP0CF97 657 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 CCDC130P13994 396 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 GJA1P17302 382 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 ADORA2BP29275 332 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 CCR2P41597 374 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 MFAP3P55082 362 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 TDGQ13569 410 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 ANO6Q4KMQ2 910 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 GPR158Q5T848 1215 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 RRAGAQ7L523 313 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 TMC8Q8IU68 726 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 UBALD2Q8IYN6 164 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 TRMT2BQ96GJ1 504 aaKnown RBP14.59□□□□□ -0.07
USF1-205ENST00000473969 HNRNPABQ99729 332 aaKnown RBP14.59□□□□□ -0.07
USF1-205ENST00000473969 ARID3AQ99856 593 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 LRRC3Q9BY71 257 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 ZFP14Q9HCL3 533 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 ZNF334Q9HCZ1 680 aaPredicted RBP14.59□□□□□ -0.07
USF1-205ENST00000473969 UBE2TQ9NPD8 197 aaPredicted RBP14.59□□□□□ -0.07
USF1-205ENST00000473969 KRT82Q9NSB4 513 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 ZMYM5Q9UJ78 669 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 C2orf16Q68DN1 1984 aa14.59□□□□□ -0.07
USF1-205ENST00000473969 BECN2A8MW95 431 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.08
USF1-205ENST00000473969 CD19P15391 556 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 HMGA1P17096 107 aaKnown RBP14.58□□□□□ -0.08
USF1-205ENST00000473969 DDX6P26196 483 aaKnown RBP eCLIP14.58□□□□□ -0.08
USF1-205ENST00000473969 MAP3K7CLP57077 242 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 ZXDAP98168 799 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 GCNT1Q02742 428 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 IFRD2Q12894 506 aaPredicted RBP14.58□□□□□ -0.08
USF1-205ENST00000473969 TMEM270Q6UE05 265 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 ENOSF1Q7L5Y1 443 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 FUKQ8N0W3 1084 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 NUP93Q8N1F7 819 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 STKLD1Q8NE28 680 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 LMO3Q8TAP4 145 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
USF1-205ENST00000473969 WHAMMQ8TF30 809 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 EDAQ92838 391 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 SMARCD2Q92925 531 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 E2F7Q96AV8 911 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 TWNKQ96RR1 684 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 TASP1Q9H6P5 420 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 FANCLQ9NW38 375 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 HESX1Q9UBX0 185 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 KIAA1257Q9ULG3 409 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 NUMBLQ9Y6R0 609 aa14.58□□□□□ -0.08
USF1-205ENST00000473969 SYCE3A1L190 88 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 ANHXE9PGG2 379 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 MOSPD3O75425 235 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 KRT5P13647 590 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 YWHAQP27348 245 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 PPP3CCP48454 512 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 RAD23BP54727 409 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 CYP4F8P98187 520 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 HTR4Q13639 388 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 SGO2Q562F6 1265 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 FKBP15Q5T1M5 1219 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 PPP1R26Q5T8A7 1209 aaPredicted RBP14.57□□□□□ -0.08
USF1-205ENST00000473969 PARM1Q6UWI2 310 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 ARHGEF19Q8IW93 802 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 SLC44A3Q8N4M1 653 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 AOPEPQ8N6M6 819 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 SLC4A11Q8NBS3 891 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 RSAD2Q8WXG1 361 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 JAKMIP2Q96AA8 810 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 MYRFLQ96LU7 910 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 SLITRK1Q96PX8 696 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 C1QTNF1Q9BXJ1 281 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 TAB2Q9NYJ8 693 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 TRPM5Q9NZQ8 1165 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 TTC28Q96AY4 2481 aa14.57□□□□□ -0.08
USF1-205ENST00000473969 SOBPA7XYQ1 873 aa14.56□□□□□ -0.08
USF1-205ENST00000473969 ECI2O75521 394 aa14.56□□□□□ -0.08
USF1-205ENST00000473969 ABL1P00519 1130 aa14.56□□□□□ -0.08
USF1-205ENST00000473969 F11P03951 625 aa14.56□□□□□ -0.08
USF1-205ENST00000473969 PAEPP09466 180 aa14.56□□□□□ -0.08
USF1-205ENST00000473969 VDRP11473 427 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms