RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PLA2G12BQ9BX93 195 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 TTYH3Q9C0H2 523 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PCDHAC1Q9H158 963 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 PLA2G3Q9NZ20 509 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 RNF181Q9P0P0 153 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SWAP70Q9UH65 585 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 SLC13A4Q9UKG4 626 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 ATP11BQ9Y2G3 1177 aa4.92□□□□□ -1.62
BRCA1-212ENST00000473961 MTO1Q9Y2Z2 717 aaKnown RBP4.92□□□□□ -1.62
BRCA1-212ENST00000473961 A0A1B0GVC2 190 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 RRN3P2A6NIE6 340 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 GOLGA6L6A8MZA4 724 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 E7ENX8 843 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 H7C4K7 107 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 EIF3FO00303 357 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 LAMTOR5O43504 91 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 ASNA1O43681 348 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 RASAL1O95294 804 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 AGR2O95994 175 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 VIPP01282 170 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 FDXRP22570 491 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 TGM1P22735 817 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 CHN2P52757 468 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 PRKAG1P54619 331 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 EPHB4P54760 987 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 TAP2Q03519 686 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 TIGD6Q17RP2 521 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 SPTY2D1Q68D10 685 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 TAX1BP1Q86VP1 789 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 RASGRP3Q8IV61 690 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 CCDC28AQ8IWP9 274 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 RHOT2Q8IXI1 618 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 CLASRPQ8N2M8 674 aaKnown RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 SPPL3Q8TCT6 385 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 GRAMD1AQ96CP6 724 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 NELL2Q99435 816 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 AGO3Q9H9G7 860 aaKnown RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 ITM2CQ9NQX7 267 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-212ENST00000473961 AGAP1Q9UPQ3 857 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 CDY1Q9Y6F8 540 aa4.91□□□□□ -1.62
BRCA1-212ENST00000473961 CCDC196A0A1B0GTZ2 297 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 HMX3A6NHT5 357 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 E9PLN8 166 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 TOR1BO14657 336 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 RRP9O43818 475 aaKnown RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 NOBOXO60393 691 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 VPS4BO75351 444 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 FCER1AP12319 257 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 SLC6A2P23975 617 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 PRKAR1BP31321 381 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 ATICP31939 592 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 PTTG1IPP53801 180 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 GEMIN4P57678 1058 aaKnown RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 AP2B1P63010 937 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 GPS1Q13098 491 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 TAF5Q15542 800 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 PREPLQ4J6C6 727 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 NT5DC1Q5TFE4 455 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 LVRNQ6Q4G3 990 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 CLEC4GQ6UXB4 293 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 KIAA0408Q6ZU52 694 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 RSRC2Q7L4I2 434 aaKnown RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 RAB11FIP2Q7L804 512 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 POLNQ7Z5Q5 900 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 C2CD5Q86YS7 1000 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 D2HGDHQ8N465 521 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 MB21D1Q8N884 522 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 PSD4Q8NDX1 1056 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 OTUD7AQ8TE49 926 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 ABHD5Q8WTS1 349 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 STYXQ8WUJ0 223 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 WDR60Q8WVS4 1066 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 THAP4Q8WY91 577 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 DCLRE1CQ96SD1 692 aaKnown RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 SEC62Q99442 399 aaKnown RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 VKORC1Q9BQB6 163 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 RTKNQ9BST9 563 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 SLC46A2Q9BY10 475 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 SLC25A32Q9H2D1 315 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 TP63Q9H3D4 680 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-212ENST00000473961 IGSF9Q9P2J2 1179 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 DKK4Q9UBT3 224 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 NFU1Q9UMS0 254 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 TMEM98Q9Y2Y6 226 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 SLC30A1Q9Y6M5 507 aa4.9□□□□□ -1.63
BRCA1-212ENST00000473961 J3KRW8 73 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 IPO5O00410 1097 aaKnown RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 FCHO1O14526 889 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 SNX2O60749 519 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
BRCA1-212ENST00000473961 RAD17O75943 681 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 RECQL4O94761 1208 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 ACTL6BO94805 426 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 SRGAP2BP0DMP2 458 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 HK1P19367 917 aa4.89□□□□□ -1.63
BRCA1-212ENST00000473961 MST1P26927 711 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms