RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 ECT2Q9H8V3 914 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 GCNT4Q9P109 453 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 EBF1Q9UH73 591 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 MAGED2Q9UNF1 606 aaPredicted RBP14.49□□□□□ -0.09
CHD3-209ENST00000473376 DNAH14Q0VDD8 3507 aa14.49□□□□□ -0.09
CHD3-209ENST00000473376 GOLGA8IPA6NC78 632 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 OTOL1A6NHN0 477 aaPredicted RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 GOLGA8JA6NMD2 632 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 ACAT1P24752 427 aaKnown RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 ATICP31939 592 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 GJA4P35212 333 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 HOXD13P35453 343 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 RAP1GAPP47736 663 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 SPEM2Q0P670 501 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 PSMD6Q15008 389 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 SNRNP35Q16560 246 aaKnown RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 PRR23CQ6ZRP0 262 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 UNC13DQ70J99 1090 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 SYT13Q7L8C5 426 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 HS2ST1Q7LGA3 356 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 TRAPPC11Q7Z392 1133 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 OSTM1Q86WC4 334 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 GPIHBP1Q8IV16 184 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 PDILTQ8N807 584 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 GOLGA5Q8TBA6 731 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 SNX21Q969T3 373 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 ACDQ96AP0 544 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 C8orf48Q96LL4 319 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 DUSP9Q99956 384 aaKnown RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 SMG9Q9H0W8 520 aaKnown RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 VRTNQ9H8Y1 702 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 AGPAT3Q9NRZ7 376 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 DUS2Q9NX74 493 aaKnown RBP14.48□□□□□ -0.09
CHD3-209ENST00000473376 SLC8A2Q9UPR5 921 aa14.48□□□□□ -0.09
CHD3-209ENST00000473376 TGFB1I1O43294 461 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 OLFM2O95897 454 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 CKMP06732 381 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 HDCP19113 662 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 GNL1P36915 607 aaPredicted RBP14.47□□□□□ -0.09
CHD3-209ENST00000473376 GPR15P49685 360 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 GALK1P51570 392 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 AP3M2P53677 418 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 SLC7A9P82251 487 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 DMWDQ09019 674 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 KCNB1Q14721 858 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 EML3Q32P44 896 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 DENND5BQ6ZUT9 1274 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 CEP68Q76N32 757 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 C11orf74Q86VG3 221 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 CBWD2Q8IUF1 395 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 FAM160A2Q8N612 972 aaPredicted RBP14.47□□□□□ -0.09
CHD3-209ENST00000473376 XXYLT1Q8NBI6 393 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 OR5B17Q8NGF7 314 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 FNBP1Q96RU3 617 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 CGRRF1Q99675 332 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 BACH2Q9BYV9 841 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 CRTAC1Q9NQ79 661 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 TRPM5Q9NZQ8 1165 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 TCHHQ07283 1943 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 DENND4CQ5VZ89 1909 aa14.47□□□□□ -0.09
CHD3-209ENST00000473376 SLC9A3R1O14745 358 aaPredicted RBP14.46□□□□□ -0.09
CHD3-209ENST00000473376 RPP40O75818 363 aaKnown RBP14.46□□□□□ -0.09
CHD3-209ENST00000473376 NFATC1O95644 943 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 ZNF806P0C7X5 589 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 LMO2P25791 158 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 ANXA13P27216 316 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 EIF2DP41214 584 aaKnown RBP14.46□□□□□ -0.09
CHD3-209ENST00000473376 IFNAR2P48551 515 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 ASIC1P78348 528 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 CLDN10P78369 228 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 CYP24A1Q07973 514 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 RIN3Q8TB24 985 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 OVCA2Q8WZ82 227 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 CD101Q93033 1021 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 ELOVL4Q9GZR5 314 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 C2orf42Q9NWW7 574 aa14.46□□□□□ -0.09
CHD3-209ENST00000473376 NCOR2Q9Y618 2525 aa14.46□□□□□ -0.1
CHD3-209ENST00000473376 PTPRJQ12913 1337 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 ZNF840PA6NDX5 716 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 EPN2O95208 641 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 EGFP01133 1207 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 ARSAP15289 507 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 TNNI1P19237 187 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 GRIK1P39086 918 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 HSF5Q4G112 596 aaPredicted RBP14.45□□□□□ -0.1
CHD3-209ENST00000473376 PLA2G2CQ5R387 149 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SDHAF4Q5VUM1 108 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 DDX42Q86XP3 938 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHD3-209ENST00000473376 SCN4BQ8IWT1 228 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SH3RF2Q8TEC5 729 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SCFD1Q8WVM8 642 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 MYLPFQ96A32 169 aa14.45□□□□□ -0.1
CHD3-209ENST00000473376 SYAP1Q96A49 352 aaPredicted RBP14.45□□□□□ -0.1
CHD3-209ENST00000473376 PCED1BQ96HM7 432 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms