RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SH2B2O14492 632 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 MCF2LO15068 1137 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ASAP2O43150 1006 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 IPO7O95373 1038 aaKnown RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 FTLP02792 175 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 OPN1MWP04001 364 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 A1BGP04217 495 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 OPN1MW2P0DN77 364 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 OPN1MW3P0DN78 364 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ITGA4P13612 1032 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 C6P13671 934 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TMEM11P17152 192 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 RXRAP19793 462 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CD247P20963 164 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 MAOBP27338 520 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 SLC7A1P30825 629 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 IFNAR2P48551 515 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ZNF41P51814 821 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 SEC24CP53992 1094 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 RAD23AP54725 363 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 SLC12A3P55017 1021 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ST5P78524 1137 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 FMO1Q01740 532 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CYP4A11Q02928 519 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 DEUP1Q05D60 604 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ZNF174Q15697 407 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CNGA2Q16280 664 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 KYNUQ16719 465 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 DENND5AQ6IQ26 1287 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TAF2Q6P1X5 1199 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 NFRKBQ6P4R8 1299 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 NLRP10Q86W26 655 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 VPS52Q8N1B4 723 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ARHGEF39Q8N4T4 335 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TTC39CQ8N584 583 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TMEM57Q8N5G2 664 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 FANCBQ8NB91 859 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 DENND6BQ8NEG7 585 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CCDC148Q8NFR7 591 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 PLBD2Q8NHP8 589 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 IL31RAQ8NI17 732 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.42□□□□□ -1.38
RTF1-203ENST00000473214 GPBAR1Q8TDU6 330 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 RNF125Q96EQ8 232 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ATP6V0BQ99437 205 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ELF4Q99607 663 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 CITED2Q99967 270 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 ZFYVE21Q9BQ24 234 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CRACR2AQ9BSW2 395 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 MKRN2Q9H000 416 aaKnown RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 NT5C3AQ9H0P0 336 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 PDCL3Q9H2J4 239 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 PRDM13Q9H4Q3 707 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 GSX1Q9H4S2 264 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 MROH8Q9H579 483 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ERVK-5Q9HDB9 667 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 C1GALT1Q9NS00 363 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 FAM105AQ9NUU6 356 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 SEPT10Q9P0V9 454 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 ADAM30Q9UKF2 790 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TBX20Q9UMR3 447 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 EXOC7Q9UPT5 735 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 CAB39Q9Y376 341 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 JRKLQ9Y4A0 524 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 USP15Q9Y4E8 981 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.42□□□□□ -1.38
RTF1-203ENST00000473214 CAMTA1Q9Y6Y1 1673 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 NALCNQ8IZF0 1738 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 NOS1P29475 1434 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
RTF1-203ENST00000473214 TRPM2O94759 1503 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CLRN2A0PK11 232 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 FAM234BA2RU67 622 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 PRAMEF27A3QJZ7 478 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CTAGE9A4FU28 777 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 AGAP14A8MT82 685 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 IKBKBO14920 756 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 RGS13O14921 159 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 KIAA0355O15063 1070 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 VILLO15195 856 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 CEP104O60308 925 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 RTN2O75298 545 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 TBX10O75333 385 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 FAM155BO75949 473 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 DDHD2O94830 711 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 UBOX5O94941 541 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ADCY5O95622 1261 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 SCG5P05408 212 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 GSTP1P09211 210 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 CSF1P09603 554 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 HSPA1AP0DMV8 641 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 HSPA1BP0DMV9 641 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 RAB6AP20340 208 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 ABCD3P28288 659 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 EEF1DP29692 281 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 GRK4P32298 578 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 GBP1P32455 592 aa6.41□□□□□ -1.38
RTF1-203ENST00000473214 RFC1P35251 1148 aaPredicted RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 EIF2DP41214 584 aaKnown RBP6.41□□□□□ -1.38
RTF1-203ENST00000473214 ATP5OP48047 213 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms