RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PAAF1Q9BRP4 392 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 MED10Q9BTT4 135 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 SLC4A5Q9BY07 1137 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 TBX21Q9UL17 535 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 NME7Q9Y5B8 376 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 TSC2P49815 1807 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 ALPK3Q96L96 1907 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 CCDC85CA6NKD9 419 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 E5RJQ4 531 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 XPO1O14980 1071 aaKnown RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 SCNN1AP37088 669 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 OR1G1P47890 313 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 PDE4CQ08493 712 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 GPNMBQ14956 572 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 LLGL2Q6P1M3 1020 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 MAIP1Q8WWC4 291 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 RUBCNQ92622 972 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 DUSP16Q9BY84 665 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 METTL5Q9NRN9 209 aaKnown RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 CACNG4Q9UBN1 327 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 MICAL3Q7RTP6 2002 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 TARSL2A2RTX5 802 aaKnown RBP15.39■□□□□ 0.05
HIF3A-206ENST00000472815 KRIT1O00522 736 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 RNF8O76064 485 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 PFKMP08237 780 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 FAM200BP0CF97 657 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 NPR3P17342 541 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 PSMA2P25787 234 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 CYP2C18P33260 490 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 PLA2G4AP47712 749 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 PEX5P50542 639 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 TSPY1Q01534 308 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 HADHQ16836 314 aaKnown RBP15.39■□□□□ 0.05
HIF3A-206ENST00000472815 LONRF2Q1L5Z9 754 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 MDH1BQ5I0G3 518 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 OVOS1Q6IE37 1185 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 PMF1Q6P1K2 205 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 MYCBPAPQ8TBZ2 947 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 COLEC11Q9BWP8 271 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 TRIM7Q9C029 511 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
HIF3A-206ENST00000472815 EFCAB14O75071 495 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 TADA2AO75478 443 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 FGGP02679 453 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 ACAT1P24752 427 aaKnown RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 BRCC3P46736 316 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 SLC6A3Q01959 620 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 YWHAHQ04917 246 aaPredicted RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 NAA30Q147X3 362 aaPredicted RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 PAN2Q504Q3 1202 aaKnown RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 C8orf74Q6P047 294 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 UBE2Q1Q7Z7E8 422 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 ANKRD7Q92527 254 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 ALG3Q92685 438 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 KRT35Q92764 455 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 DDX56Q9NY93 547 aaKnown RBP15.38■□□□□ 0.05
HIF3A-206ENST00000472815 USTQ9Y2C2 406 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 TET1Q8NFU7 2136 aa15.38■□□□□ 0.05
HIF3A-206ENST00000472815 SYN3O14994 580 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 HCRTO43612 131 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 DDHD2O94830 711 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ALDH2P05091 517 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RHOXF2BP0C7M4 288 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RFC1P35251 1148 aaPredicted RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RPL34P49207 117 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RGS7P49802 495 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RNASE9P60153 205 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ELAVL2Q12926 359 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 FAM183BPQ6ZVS7 135 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ZNF280BQ86YH2 543 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 KATNAL2Q8IYT4 538 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 FUKQ8N0W3 1084 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 LRRC43Q8N309 656 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 HASPINQ8TF76 798 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 TSC1Q92574 1164 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 SMARCD1Q96GM5 515 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RBM41Q96IZ5 413 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 CASD1Q96PB1 797 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RHOXF2Q9BQY4 288 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 TMEM175Q9BSA9 504 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 RBM12Q9NTZ6 932 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ERLIN1O75477 346 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 KRT7P08729 469 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 GPD1P21695 349 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 INTS6LQ5JSJ4 861 aaKnown RBP15.37■□□□□ 0.05
HIF3A-206ENST00000472815 EFHC1Q5JVL4 640 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 ZFYVE27Q5T4F4 411 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 DCAF12L1Q5VU92 463 aa15.37■□□□□ 0.05
HIF3A-206ENST00000472815 C4orf50Q6ZRC1 276 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms