RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 MGAT5BQ3V5L5 792 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 LRSAM1Q6UWE0 723 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 RRAGAQ7L523 313 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 SPATA2LQ8IUW3 424 aaPredicted RBP18.31■□□□□ 0.52
PKD1-208ENST00000472577 CRYBG2Q8N1P7 616 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 PPM1KQ8N3J5 372 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 SEPT5Q99719 369 aaPredicted RBP18.31■□□□□ 0.52
PKD1-208ENST00000472577 KCNK12Q9HB15 430 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 DUSP12Q9UNI6 340 aa18.31■□□□□ 0.52
PKD1-208ENST00000472577 LRRC10BA6NIK2 292 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 CAVIN2O95810 425 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 POU2F2P09086 479 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 TBXAS1P24557 533 aaPredicted RBP18.3■□□□□ 0.52
PKD1-208ENST00000472577 CYP2F1P24903 491 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 CYP27A1Q02318 531 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 TDGQ13569 410 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 MAPRE1Q15691 268 aaKnown RBP18.3■□□□□ 0.52
PKD1-208ENST00000472577 CFAP221Q4G0U5 840 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 ZNF394Q53GI3 561 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 CYP26C1Q6V0L0 522 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 C4orf50Q6ZRC1 276 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 OTOP3Q7RTS5 596 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 RSAD2Q8WXG1 361 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 ACSF2Q96CM8 615 aaPredicted RBP18.3■□□□□ 0.52
PKD1-208ENST00000472577 FUBP3Q96I24 572 aaKnown RBP eCLIP18.3■□□□□ 0.52
PKD1-208ENST00000472577 KREMEN1Q96MU8 473 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 NT5C1AQ9BXI3 368 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 B3GNT5Q9BYG0 378 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 PIDD1Q9HB75 910 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 ABCB6Q9NP58 842 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 HCFC1R1Q9NWW0 138 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 CEP72Q9P209 647 aa18.3■□□□□ 0.52
PKD1-208ENST00000472577 RIF1Q5UIP0 2472 aaKnown RBP18.3■□□□□ 0.52
PKD1-208ENST00000472577 PTPRDP23468 1912 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 CLDN5O00501 218 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 XYLBO75191 536 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 ATF6P18850 670 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 AOC1P19801 751 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 ACO1P21399 889 aaKnown RBP18.29■□□□□ 0.52
PKD1-208ENST00000472577 BDNFP23560 247 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 TUFMP49411 452 aaKnown RBP18.29■□□□□ 0.52
PKD1-208ENST00000472577 GPR15P49685 360 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 RAD23BP54727 409 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 GCNT1Q02742 428 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 DPY19L2P1Q6NXN4 242 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 SIX5Q8N196 739 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 TTC39CQ8N584 583 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 C12orf29Q8N999 325 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 FAM200AQ8TCP9 573 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 ZNF518BQ9C0D4 1074 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 TSPY26PQ9H489 355 aa18.29■□□□□ 0.52
PKD1-208ENST00000472577 FAM124BQ9H5Z6 455 aaPredicted RBP18.29■□□□□ 0.52
PKD1-208ENST00000472577 DNMT3BQ9UBC3 853 aaKnown RBP18.29■□□□□ 0.52
PKD1-208ENST00000472577 FAM186AA6NE01 2351 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
PKD1-208ENST00000472577 LGALS16A8MUM7 142 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 TPM2P07951 284 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 CCDC130P13994 396 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 ALDH1A3P47895 512 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 YWHAEP62258 255 aaKnown RBP18.28■□□□□ 0.52
PKD1-208ENST00000472577 NTHL1P78549 312 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 PLD1Q13393 1074 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 PAQR9Q6ZVX9 377 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 GRASPQ7Z6J2 395 aaPredicted RBP18.28■□□□□ 0.52
PKD1-208ENST00000472577 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 SLC4A11Q8NBS3 891 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 UBE2TQ9NPD8 197 aaPredicted RBP18.28■□□□□ 0.52
PKD1-208ENST00000472577 FAM49BQ9NUQ9 324 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 APEX2Q9UBZ4 518 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 AJAP1Q9UKB5 411 aaPredicted RBP18.28■□□□□ 0.52
PKD1-208ENST00000472577 GVINP1Q7Z2Y8 2422 aa18.28■□□□□ 0.52
PKD1-208ENST00000472577 DOCK8Q8NF50 2099 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 CLUHO75153 1309 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 DCHS1Q96JQ0 3298 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 MAGEA11P43364 429 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 CACNA2D1P54289 1103 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 EPHB3P54753 998 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 ZNF445P59923 1031 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 DDR2Q16832 855 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 SDHAF4Q5VUM1 108 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 FAM35AQ86V20 835 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 STKLD1Q8NE28 680 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 TMEM176AQ96HP8 235 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 MYADMQ96S97 322 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 WDR6Q9NNW5 1121 aaKnown RBP18.27■□□□□ 0.52
PKD1-208ENST00000472577 TMEM30AQ9NV96 361 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 FBXL21Q9UKT6 434 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 PCDHB4Q9Y5E5 795 aa18.27■□□□□ 0.52
PKD1-208ENST00000472577 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.51
PKD1-208ENST00000472577 NOTCH4Q99466 2003 aa18.27■□□□□ 0.51
PKD1-208ENST00000472577 KRBA1A5PL33 1030 aa18.26■□□□□ 0.51
PKD1-208ENST00000472577 RNF225M0QZC1 329 aaPredicted RBP18.26■□□□□ 0.51
PKD1-208ENST00000472577 CFHP08603 1231 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms