RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SMYD5Q6GMV2 418 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 DENND5BQ6ZUT9 1274 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 FAM35AQ86V20 835 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 TMC8Q8IU68 726 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SLC2A14Q8TDB8 520 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 GPR152Q8TDT2 470 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 ING5Q8WYH8 240 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 MYRFLQ96LU7 910 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 HNRNPABQ99729 332 aaKnown RBP15.08■□□□□ 0
BRCA1-211ENST00000472490 ARID3AQ99856 593 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 LRRC3Q9BY71 257 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 ZNF518BQ9C0D4 1074 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SLITRK6Q9H5Y7 841 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 HMGXB4Q9UGU5 601 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 SORCS3Q9UPU3 1222 aa15.08■□□□□ 0
BRCA1-211ENST00000472490 A0A1W2PRU2 124 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 SLC38A8A6NNN8 435 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 SOBPA7XYQ1 873 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 F8VP50 259 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 CLDN5O00501 218 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 CAVIN2O95810 425 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 FAM200BP0CF97 657 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 CDK11BP21127 795 aaKnown RBP15.07■□□□□ 0
BRCA1-211ENST00000472490 DDX6P26196 483 aaKnown RBP eCLIP15.07■□□□□ 0
BRCA1-211ENST00000472490 PPP3CCP48454 512 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 GPR15P49685 360 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 MFAP3P55082 362 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 ORC1Q13415 861 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 PTPN21Q16825 1174 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 CDKAL1Q5VV42 579 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 UBALD2Q8IYN6 164 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 FUKQ8N0W3 1084 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 C12orf29Q8N999 325 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 WHAMMQ8TF30 809 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 MCRS1Q96EZ8 462 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 TWNKQ96RR1 684 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 KCNK12Q9HB15 430 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 KRT82Q9NSB4 513 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 FAM49BQ9NUQ9 324 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 FANCLQ9NW38 375 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 MUTYHQ9UIF7 546 aa15.07■□□□□ 0
BRCA1-211ENST00000472490 MTCL1Q9Y4B5 1905 aaKnown RBP15.07■□□□□ 0
BRCA1-211ENST00000472490 SYCE3A1L190 88 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 BECN2A8MW95 431 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 ANHXE9PGG2 379 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 PI4K2BG5E9Z4 385 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 AP1G2O75843 785 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 RTN3O95197 1032 aaPredicted RBP15.06■□□□□ 0
BRCA1-211ENST00000472490 PAEPP09466 180 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 CCDC130P13994 396 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 HMGA1P17096 107 aaKnown RBP15.06■□□□□ 0
BRCA1-211ENST00000472490 CEBPBP17676 345 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 CCR2P41597 374 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 ZNF165P49910 485 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 RAD23BP54727 409 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 TDGQ13569 410 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 TEAD2Q15562 447 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 MIIPQ5JXC2 388 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 FKBP15Q5T1M5 1219 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 SDHAF4Q5VUM1 108 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 RRAGAQ7L523 313 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 NUP93Q8N1F7 819 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 SHKBP1Q8TBC3 707 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 MRPS31Q92665 395 aaKnown RBP15.06■□□□□ 0
BRCA1-211ENST00000472490 E2F7Q96AV8 911 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 TCEAL4Q96EI5 215 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 CRACR2AQ9BSW2 395 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 CSNK1G1Q9HCP0 422 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 PNPLA8Q9NP80 782 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 UBE2TQ9NPD8 197 aaPredicted RBP15.06■□□□□ 0
BRCA1-211ENST00000472490 COMMD8Q9NX08 183 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 APEX2Q9UBZ4 518 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 PCDHB4Q9Y5E5 795 aa15.06■□□□□ 0
BRCA1-211ENST00000472490 BRWD1Q9NSI6 2320 aa15.05■□□□□ 0
BRCA1-211ENST00000472490 VDRP11473 427 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 PON1P27169 355 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 ADORA2BP29275 332 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 PDE6CP51160 858 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 TPM4P67936 248 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 STILQ15468 1287 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 SGO2Q562F6 1265 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 GPR158Q5T848 1215 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 PHLDB3Q6NSJ2 640 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 TMEM270Q6UE05 265 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 PAQR9Q6ZVX9 377 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 GAREM2Q75VX8 874 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 AOPEPQ8N6M6 819 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 SLC4A11Q8NBS3 891 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 ZSCAN18Q8TBC5 510 aaPredicted RBP15.05■□□□□ -0
BRCA1-211ENST00000472490 SMARCD2Q92925 531 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 SLITRK1Q96PX8 696 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 TASP1Q9H6P5 420 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 IL21Q9HBE4 155 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 ZFP14Q9HCL3 533 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 ZNF334Q9HCZ1 680 aaPredicted RBP15.05■□□□□ -0
BRCA1-211ENST00000472490 HESX1Q9UBX0 185 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 VCANP13611 3396 aa15.05■□□□□ -0
BRCA1-211ENST00000472490 MOSPD3O75425 235 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms