RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 MESP2Q0VG99 397 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 CRY1Q16526 586 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 NFE2Q16621 373 aaPredicted RBP21.27■■□□□ 1
CCDC78-208ENST00000471861 ADALQ6DHV7 355 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 CCDC33Q8N5R6 958 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 FRMD1Q8N878 549 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 FNBP1Q96RU3 617 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 ABCB6Q9NP58 842 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 TMEM74BQ9NUR3 256 aa21.27■■□□□ 1
CCDC78-208ENST00000471861 UXTQ9UBK9 157 aaPredicted RBP21.27■■□□□ 1
CCDC78-208ENST00000471861 DSPP15924 2871 aaKnown RBP21.27■■□□□ 1
CCDC78-208ENST00000471861 CACNA1EQ15878 2313 aa21.27■□□□□ 0.99
CCDC78-208ENST00000471861 TCF3P15923 654 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 TRIM61Q5EBN2 209 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 INTS6LQ5JSJ4 861 aaKnown RBP21.26■□□□□ 0.99
CCDC78-208ENST00000471861 LRSAM1Q6UWE0 723 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 OSTM1Q86WC4 334 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 RLN3Q8WXF3 142 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 FAM84AQ96KN4 292 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 AGO2Q9UKV8 859 aaKnown RBP21.26■□□□□ 0.99
CCDC78-208ENST00000471861 NEUROG3Q9Y4Z2 214 aa21.26■□□□□ 0.99
CCDC78-208ENST00000471861 P2RY2P41231 377 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 PTGER3P43115 390 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 RPL10AP62906 217 aaKnown RBP21.25■□□□□ 0.99
CCDC78-208ENST00000471861 DHX8Q14562 1220 aaKnown RBP21.25■□□□□ 0.99
CCDC78-208ENST00000471861 ARMCX6Q7L4S7 300 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 CXorf38Q8TB03 319 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 ZNF560Q96MR9 790 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 ACBD6Q9BR61 282 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 DDX43Q9NXZ2 648 aaKnown RBP21.25■□□□□ 0.99
CCDC78-208ENST00000471861 MBD1Q9UIS9 605 aaPredicted RBP21.25■□□□□ 0.99
CCDC78-208ENST00000471861 GTF3C4Q9UKN8 822 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 ARHGAP26Q9UNA1 814 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 LHX6Q9UPM6 363 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 NBEAQ8NFP9 2946 aa21.25■□□□□ 0.99
CCDC78-208ENST00000471861 SPAARA0A1B0GVQ0 90 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 SEC24BO95487 1268 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 ADSSP30520 456 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 POLR2BP30876 1174 aaKnown RBP21.24■□□□□ 0.99
CCDC78-208ENST00000471861 MAPK8P45983 427 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 MCM6Q14566 821 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 RILPL1Q5EBL4 403 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 PIP4P1Q86T03 277 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 C1orf127Q8N9H9 656 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 ZSWIM2Q8NEG5 633 aa21.24■□□□□ 0.99
CCDC78-208ENST00000471861 ATXN2Q99700 1313 aaKnown RBP21.24■□□□□ 0.99
CCDC78-208ENST00000471861 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 NFATC1O95644 943 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 CYP17A1P05093 508 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 ENGP17813 658 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 NR1H3Q13133 447 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 CFAP221Q4G0U5 840 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 TTC30AQ86WT1 665 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 TMEFF1Q8IYR6 380 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 ALLCQ8N6M5 410 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 CCDC26Q8TAB7 109 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 ZHX3Q9H4I2 956 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 FSCN3Q9NQT6 498 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 MSRB2Q9Y3D2 182 aa21.23■□□□□ 0.99
CCDC78-208ENST00000471861 ANKRD11Q6UB99 2663 aaPredicted RBP21.23■□□□□ 0.99
CCDC78-208ENST00000471861 ITPR1Q14643 2758 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 LOC400499M0QZD8 3231 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 PLXND1Q9Y4D7 1925 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 SGK1O00141 431 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 TAF4O00268 1085 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 TNFRSF10BO14763 440 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 ITGB3P05106 788 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 PNPLA4P41247 253 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 POU5F1Q01860 360 aaKnown RBP21.22■□□□□ 0.99
CCDC78-208ENST00000471861 LMAN2Q12907 356 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 KCNB1Q14721 858 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 ARL6IP4Q66PJ3 421 aaKnown RBP21.22■□□□□ 0.99
CCDC78-208ENST00000471861 IL17RCQ8NAC3 791 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 ST6GALNAC4Q9H4F1 302 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 AGAP1Q9UPQ3 857 aa21.22■□□□□ 0.99
CCDC78-208ENST00000471861 SMG1Q96Q15 3661 aaKnown RBP21.22■□□□□ 0.99
CCDC78-208ENST00000471861 LEFTY2O00292 366 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 IL18RAPO95256 599 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 CAPNS1P04632 268 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 HDCP19113 662 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 PLCG1P19174 1290 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 USP46P62068 366 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 SEMA3BQ13214 749 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 MAP7D1Q3KQU3 841 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 PEAR1Q5VY43 1037 aaPredicted RBP21.21■□□□□ 0.99
CCDC78-208ENST00000471861 SLFN12LQ6IEE8 588 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 LPCAT2Q7L5N7 544 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 C12orf40Q86WS4 652 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 NT5DC4Q86YG4 428 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 SYT12Q8IV01 421 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 SCN4BQ8IWT1 228 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 TXNDC5Q8NBS9 432 aaKnown RBP21.21■□□□□ 0.99
CCDC78-208ENST00000471861 ZSCAN31Q96LW9 406 aaPredicted RBP21.21■□□□□ 0.99
CCDC78-208ENST00000471861 NUSAP1Q9BXS6 441 aaKnown RBP21.21■□□□□ 0.99
CCDC78-208ENST00000471861 ZDHHC4Q9NPG8 344 aa21.21■□□□□ 0.99
CCDC78-208ENST00000471861 PCNX2A6NKB5 2137 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 PCDH15Q96QU1 1955 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 GABRDO14764 452 aa21.2■□□□□ 0.98
CCDC78-208ENST00000471861 TBCAO75347 108 aaKnown RBP21.2■□□□□ 0.98
CCDC78-208ENST00000471861 PPP1R37O75864 691 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms