RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 TMEM240Q5SV17 173 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 L1TD1Q5T7N2 865 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 Q6ZWC4 215 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 GALNT16Q8N428 558 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 PRSS3P2Q8NHM4 247 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 ZCRB1Q8TBF4 217 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 MAP3K14Q99558 947 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 GTPBP4Q9BZE4 634 aaKnown RBP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 PRSS22Q9GZN4 317 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 HOMER2Q9NSB8 354 aa4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 TUBA8Q9NY65 449 aaPredicted RBP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
PRPF40A-207ENST00000471701 CYP2D7A0A087X1C5 515 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 POC1B-GALNT4F8VUJ3 575 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 UBE2Q2LH0YL09 131 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 hCG_1984214I3L0E3 225 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 PRKCBP05771 671 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 PDE6CP51160 858 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 SERPINA13PQ6UXR4 307 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 SLC15A3Q8IY34 581 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 GALNT4Q8N4A0 578 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 OSCP1Q8WVF1 389 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 CHMP4CQ96CF2 233 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 HMCESQ96FZ2 354 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 ZNF48Q96MX3 618 aaPredicted RBP4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 MACROD1Q9BQ69 325 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 TMEM79Q9BSE2 394 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 ARMT1Q9H993 441 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 TRMT13Q9NUP7 481 aaKnown RBP4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 ZSCAN32Q9NX65 697 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 ELOVL5Q9NYP7 299 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 ANKRD6Q9Y2G4 727 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 MRPS17Q9Y2R5 130 aaKnown RBP4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 WDR17Q8IZU2 1322 aa4.35□□□□□ -1.71
PRPF40A-207ENST00000471701 H7C1Q1 480 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 PDE8BO95263 885 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 ARHGAP25P42331 645 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 UCP3P55916 312 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 KRT17Q04695 432 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 FGL2Q14314 439 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 DAZAP2Q15038 168 aaPredicted RBP4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 MGAT5BQ3V5L5 792 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 DEPDC1Q5TB30 811 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 GRAMD1CQ8IYS0 662 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 TERB1Q8NA31 727 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 C8orf58Q8NAV2 365 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 C1GALT1C1Q96EU7 318 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 VPS16Q9H269 839 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 PCDH12Q9NPG4 1184 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 PIH1D1Q9NWS0 290 aaKnown RBP4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 STXBP5LQ9Y2K9 1186 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 COL4A3BPQ9Y5P4 624 aa4.34□□□□□ -1.71
PRPF40A-207ENST00000471701 PSMD9O00233 223 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 ADAMTS3O15072 1205 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 TOP3BO95985 862 aaKnown RBP4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 CT47B1P0C2W7 299 aaPredicted RBP4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 POLGP54098 1239 aaPredicted RBP4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 LAMB3Q13751 1172 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 RABEP1Q15276 862 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 FCRL6Q6DN72 434 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 HPS3Q969F9 1004 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 CCDC17Q96LX7 622 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 CAMKK2Q96RR4 588 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 NUP88Q99567 741 aaPredicted RBP4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 CGRRF1Q99675 332 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 SPRTNQ9H040 489 aaPredicted RBP4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 PDGFCQ9NRA1 345 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 AASDHPPTQ9NRN7 309 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 IP6K2Q9UHH9 426 aa4.33□□□□□ -1.72
PRPF40A-207ENST00000471701 DSCR3O14972 297 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 OFD1O75665 1012 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 TJP3O95049 919 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 ALDH2P05091 517 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 CHRM5P08912 532 aaPredicted RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 MYCLP12524 364 aaPredicted RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 IBSPP21815 317 aaPredicted RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 IL1R2P27930 398 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 NR4A2P43354 598 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 SLC11A2P49281 568 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 PRKAG1P54619 331 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 MYO1EQ12965 1108 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 FHL1Q13642 323 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 BRDTQ58F21 947 aaPredicted RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 ATAT1Q5SQI0 421 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 CAND1Q86VP6 1230 aaKnown RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 ZNF280BQ86YH2 543 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 ABRAQ8N0Z2 381 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 SLC15A4Q8N697 577 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 SIRT6Q8N6T7 355 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 ADAMTS18Q8TE60 1221 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 SOCS4Q8WXH5 440 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 RITA1Q96K30 269 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 LENG8Q96PV6 779 aaPredicted RBP4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 SNX18Q96RF0 628 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 FAM118BQ9BPY3 351 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 CIPCQ9C0C6 399 aa4.32□□□□□ -1.72
PRPF40A-207ENST00000471701 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms