RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NDRG2Q9UN36 371 aaKnown RBP14.42□□□□□ -0.1
HMGN1-211ENST00000471260 MAGED2Q9UNF1 606 aaPredicted RBP14.42□□□□□ -0.1
HMGN1-211ENST00000471260 PCDHGA2Q9Y5H1 932 aa14.42□□□□□ -0.1
HMGN1-211ENST00000471260 RIF1Q5UIP0 2472 aaKnown RBP14.42□□□□□ -0.1
HMGN1-211ENST00000471260 FAM186AA6NE01 2351 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 DENND4CQ5VZ89 1909 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 TICRRQ7Z2Z1 1910 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 MAPK13O15264 365 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 PHACTR2O75167 634 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 RHOBTB3O94955 611 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 RPN1P04843 607 aaKnown RBP14.41□□□□□ -0.1
HMGN1-211ENST00000471260 CHRNB1P11230 501 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 PFKLP17858 780 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 NDUFA8P51970 172 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 LRRC32Q14392 662 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 DGKKQ5KSL6 1271 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 SCN4BQ8IWT1 228 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 MAB21L3Q8N8X9 362 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 MYCBPAPQ8TBZ2 947 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 NELL1Q92832 810 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 MYLPFQ96A32 169 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 XYLT2Q9H1B5 865 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 LMAN1LQ9HAT1 526 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 CRTAC1Q9NQ79 661 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 PRMT8Q9NR22 394 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-211ENST00000471260 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 TRAF3IP3Q9Y228 551 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 COL4A3Q01955 1670 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 FANCMQ8IYD8 2048 aa14.41□□□□□ -0.1
HMGN1-211ENST00000471260 SPECC1L-ADORA2AF8WAN1 911 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 IKBKBO14920 756 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 TRIM66O15016 1216 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 HCRTO43612 131 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 CALUO43852 315 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-211ENST00000471260 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ATP2C2O75185 946 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 C4BPAP04003 597 aaKnown RBP14.4□□□□□ -0.1
HMGN1-211ENST00000471260 PDGFRBP09619 1106 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ANXA13P27216 316 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 CTHP32929 405 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 PPP3CCP48454 512 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 PDE6CP51160 858 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 CCR3P51677 355 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 NRLP54845 237 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 MYL6P60660 151 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 UBE2HP62256 183 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 AMPD2Q01433 879 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 CSTF1Q05048 431 aaKnown RBP14.4□□□□□ -0.1
HMGN1-211ENST00000471260 MTAPQ13126 283 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 NFIL3Q16649 462 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ITPRIPL2Q3MIP1 535 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 CCDC183Q5T5S1 534 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 TXNDC8Q6A555 127 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 SYNPOQ8N3V7 929 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ZBTB44Q8NCP5 570 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 OR6B3Q8NGW1 331 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 TMC2Q8TDI7 906 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 USP13Q92995 863 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-211ENST00000471260 PCED1BQ96HM7 432 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 C8orf48Q96LL4 319 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 FAM83CQ9BQN1 747 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 ZSCAN32Q9NX65 697 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 GTSE1Q9NYZ3 720 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 FRMD4BQ9Y2L6 1034 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 R4GN57 208 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 PATJQ8NI35 1801 aa14.4□□□□□ -0.1
HMGN1-211ENST00000471260 TRAV19A0A0A6YYK7 116 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 LRRIQ3A6PVS8 624 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 NR3C1P04150 777 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 USP17L7P0C7H9 530 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 PTPN1P18031 435 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 BDNFP23560 247 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 GRIK1P39086 918 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 PSMC1P62191 440 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 NOP14P78316 857 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 CYP27A1Q02318 531 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 FAM160A1Q05DH4 1040 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 ENPEPQ07075 957 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 DPYDQ12882 1025 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 BIRC3Q13489 604 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 KCNB1Q14721 858 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 TDRD10Q5VZ19 366 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 CC2D1AQ6P1N0 951 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 KRBA2Q6ZNG9 492 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 DENND5BQ6ZUT9 1274 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 GPIHBP1Q8IV16 184 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 ATRIPQ8WXE1 791 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 TAF4BQ92750 862 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 MRPL45Q9BRJ2 306 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 TSPY26PQ9H489 355 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 GKN1Q9NS71 199 aa14.39□□□□□ -0.11
HMGN1-211ENST00000471260 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
HMGN1-211ENST00000471260 A8MXQ7 604 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 LILRB5O75023 590 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 TADA3O75528 432 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 ZNF202O95125 648 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 P4HA1P13674 534 aa14.38□□□□□ -0.11
HMGN1-211ENST00000471260 TCF3P15923 654 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms