RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 STX10O60499 249 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 CCNE1P24864 410 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 PMS1P54277 932 aaKnown RBP16.72■□□□□ 0.27
HDAC6-218ENST00000470942 UBE2HP62256 183 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 NHLH1Q02575 133 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TCF15Q12870 199 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TCERG1LQ5VWI1 586 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 KRT39Q6A163 491 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TXNDC8Q6A555 127 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TPRG1Q6ZUI0 275 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TAS1R2Q8TE23 839 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 DNASE1L2Q92874 299 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TRMT2BQ96GJ1 504 aaKnown RBP16.72■□□□□ 0.27
HDAC6-218ENST00000470942 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
HDAC6-218ENST00000470942 TNIP3Q96KP6 325 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 SPATA17Q96L03 361 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 MED10Q9BTT4 135 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 FOXQ1Q9C009 403 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 SMG9Q9H0W8 520 aaKnown RBP16.72■□□□□ 0.27
HDAC6-218ENST00000470942 ZMYM5Q9UJ78 669 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 ANAPC1Q9H1A4 1944 aa16.72■□□□□ 0.27
HDAC6-218ENST00000470942 NCANO14594 1321 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 ATP8B3O60423 1300 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 KANSL1LA0AUZ9 987 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 F8VP50 259 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 CLDN5O00501 218 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 SLC16A3O15427 465 aaKnown RBP16.71■□□□□ 0.27
HDAC6-218ENST00000470942 DCNP07585 359 aaKnown RBP16.71■□□□□ 0.27
HDAC6-218ENST00000470942 CD72P21854 359 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 DDX6P26196 483 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDAC6-218ENST00000470942 GTF2H1P32780 548 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 AVPR1AP37288 418 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 PPP1R2P41236 205 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 LRRC63Q05C16 580 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 UBXN2BQ14CS0 331 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 DCAF17Q5H9S7 520 aaPredicted RBP16.71■□□□□ 0.27
HDAC6-218ENST00000470942 KLHL10Q6JEL2 608 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 DENND5BQ6ZUT9 1274 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 ACOT1Q86TX2 421 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 CMTM8Q8IZV2 173 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 CSGALNACT1Q8TDX6 532 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 MYRFLQ96LU7 910 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 ZNF518BQ9C0D4 1074 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 ELOVL4Q9GZR5 314 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 TRPC7Q9HCX4 862 aa16.71■□□□□ 0.27
HDAC6-218ENST00000470942 H0Y858 1186 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 CHADO15335 359 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 CD44P16070 742 aaKnown RBP16.7■□□□□ 0.26
HDAC6-218ENST00000470942 WEE1P30291 646 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 ASPAP45381 313 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 MXI1P50539 228 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 NDST1P52848 882 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 NOP14P78316 857 aaKnown RBP16.7■□□□□ 0.26
HDAC6-218ENST00000470942 ORC1Q13415 861 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 MON1AQ86VX9 555 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
HDAC6-218ENST00000470942 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 PJA1Q8NG27 643 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 C8orf48Q96LL4 319 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 CEP295NLQ96MC4 621 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 APOBEC3GQ9HC16 384 aaKnown RBP16.7■□□□□ 0.26
HDAC6-218ENST00000470942 OBP2AQ9NY56 170 aa16.7■□□□□ 0.26
HDAC6-218ENST00000470942 FAM170BA6NMN3 283 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 SOBPA7XYQ1 873 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 LRRN2O75325 713 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 TADA3O75528 432 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 MCCD1P59942 119 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 FCHO2Q0JRZ9 810 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 IFRD2Q12894 506 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 MORC3Q14149 939 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 CAMK4Q16566 473 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ZNF852Q6ZMS4 543 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 UNC93AQ86WB7 457 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 FBXL13Q8NEE6 735 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 NELFBQ8WX92 580 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ATOH1Q92858 354 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 LRRC3BQ96PB8 259 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 DDX23Q9BUQ8 820 aaKnown RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 BCO2Q9BYV7 579 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 NIF3L1Q9GZT8 377 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 LTB4R2Q9NPC1 389 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 TRPV5Q9NQA5 729 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 THG1LQ9NWX6 298 aaKnown RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
HDAC6-218ENST00000470942 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 MTF2Q9Y483 593 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 KIF26AQ9ULI4 1882 aaPredicted RBP16.69■□□□□ 0.26
HDAC6-218ENST00000470942 COL4A2P08572 1712 aa16.68■□□□□ 0.26
HDAC6-218ENST00000470942 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms