RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 FGL2Q14314 439 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ZNF169Q14929 603 aaPredicted RBP5.12□□□□□ -1.59
COL9A1-206ENST00000470652 MINDY4Q4G0A6 757 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 PRR16Q569H4 304 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 FAM102BQ5T8I3 360 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 KIAA0895LQ68EN5 471 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 DAAM2Q86T65 1068 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 PSD4Q8NDX1 1056 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 SLC30A5Q8TAD4 765 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 CAGE1Q8TC20 777 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 PGBD1Q96JS3 809 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ARMT1Q9H993 441 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ANLNQ9NQW6 1124 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 SLC52A1Q9NWF4 448 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 GABBR1Q9UBS5 961 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ZNHIT2Q9UHR6 403 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 RAD54BQ9Y620 910 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 SALL3Q9BXA9 1300 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 METP08581 1390 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 PIK3C2GO75747 1445 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ADAMTS13Q76LX8 1427 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 PTPRUQ92729 1446 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 SCAF11Q99590 1463 aaKnown RBP5.12□□□□□ -1.59
COL9A1-206ENST00000470652 NRXN1Q9ULB1 1477 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ADGRB1O14514 1584 aa5.12□□□□□ -1.59
COL9A1-206ENST00000470652 ARHGEF28Q8N1W1 1705 aaKnown RBP5.11□□□□□ -1.59
COL9A1-206ENST00000470652 XIRP1Q702N8 1843 aaKnown RBP5.11□□□□□ -1.59
COL9A1-206ENST00000470652 M0QYG6 137 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 MPPED1O15442 326 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 CTNND1O60716 968 aaKnown RBP5.11□□□□□ -1.59
COL9A1-206ENST00000470652 VPS4BO75351 444 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 SCGB1D2O95969 90 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 HDCP19113 662 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 ITGALP20701 1170 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 KCNJ5P48544 419 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 NDUFV1P49821 464 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 SOX8P57073 446 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 NXPH1P58417 271 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 RAB1AP62820 205 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 ITIH3Q06033 890 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PTPRRQ15256 657 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 AMOTQ4VCS5 1084 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 STRIP1Q5VSL9 837 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 FAM160B1Q5W0V3 765 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 NXNQ6DKJ4 435 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 TAF2Q6P1X5 1199 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PLBD2Q8NHP8 589 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 FBXL20Q96IG2 436 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PDLIM2Q96JY6 352 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PUS7Q96PZ0 661 aaKnown RBP5.11□□□□□ -1.59
COL9A1-206ENST00000470652 OSBPL9Q96SU4 736 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 HEPHQ9BQS7 1158 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 SYNPO2LQ9H987 977 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 STK26Q9P289 416 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PCDHA6Q9UN73 950 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 INSL6Q9Y581 213 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 PLEKHH1Q9ULM0 1364 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 MYOM2P54296 1465 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 SETBP1Q9Y6X0 1596 aa5.11□□□□□ -1.59
COL9A1-206ENST00000470652 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 CCDC151A5D8V7 595 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 CHD2O14647 1828 aaKnown RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 KIAA0355O15063 1070 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 NPHP4O75161 1426 aaPredicted RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 NUDT3O95989 172 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 PIM1P11309 404 aaPredicted RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 LMO1P25800 156 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 PLA2G5P39877 138 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 RARRES1P49788 294 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 GPSM2P81274 684 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 LRRC41Q15345 812 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 ANO6Q4KMQ2 910 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 KAZNQ674X7 775 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 TCEAL8Q8IYN2 117 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 PCSK9Q8NBP7 692 aaKnown RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 B3GALNT2Q8NCR0 500 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 TOR1AIP2Q8NFQ8 470 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 ACTRT2Q8TDY3 377 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 LPIN2Q92539 896 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 LRFN3Q9BTN0 628 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 SMOC2Q9H3U7 446 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 MRPS18AQ9NVS2 196 aaKnown RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 PIH1D1Q9NWS0 290 aaKnown RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 CPA4Q9UI42 421 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 NOB1Q9ULX3 412 aaKnown RBP5.1□□□□□ -1.59
COL9A1-206ENST00000470652 PLEKHM1Q9Y4G2 1056 aa5.1□□□□□ -1.59
COL9A1-206ENST00000470652 RGPD8O14715 1765 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 XRN1Q8IZH2 1706 aaKnown RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 KIAA1210Q9ULL0 1709 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 QRICH2Q9H0J4 1663 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 MED14O60244 1454 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 RALGAPBQ86X10 1494 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 ERC2O15083 957 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 ORC4O43929 436 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 THP07101 528 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 PPP3CBP16298 524 aa5.09□□□□□ -1.59
COL9A1-206ENST00000470652 GCLCP48506 637 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 TOB1P50616 345 aaPredicted RBP5.09□□□□□ -1.59
COL9A1-206ENST00000470652 AGFG1P52594 562 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms