RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 USP2O75604 605 aaPredicted RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 TCEA3O75764 348 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 KRT19P08727 400 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 GHRP10912 638 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 CD19P15391 556 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ATP2A2P16615 1042 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 PSMA2P25787 234 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 MARK3P27448 753 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ATICP31939 592 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 PHBP35232 272 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ZNF132P52740 706 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 MYL6P60660 151 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 CCNA1P78396 465 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ACAP1Q15027 740 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 TFDP3Q5H9I0 405 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ZNF484Q5JVG2 852 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 CENPUQ71F23 418 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 POLNQ7Z5Q5 900 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 PRRT2Q7Z6L0 340 aaPredicted RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 PHLDB2Q86SQ0 1253 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 RHPN2Q8IUC4 686 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 RELL1Q8IUW5 271 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ZCCHC9Q8N567 271 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 PLPP7Q8NBV4 271 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 OR5B17Q8NGF7 314 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ARHGEF2Q92974 986 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 SEC16BQ96JE7 1060 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 NLRP4Q96MN2 994 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 SPATA33Q96N06 139 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 SLITRK1Q96PX8 696 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 GPR20Q99678 358 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ADPGKQ9BRR6 497 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 HEMGNQ9BXL5 484 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 LHX5Q9H2C1 402 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 CYP3A43Q9HB55 503 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 ERAP1Q9NZ08 941 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 SENP1Q9P0U3 644 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 DDX20Q9UHI6 824 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 SHOC2Q9UQ13 582 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 DRG1Q9Y295 367 aaKnown RBP8.42□□□□□ -1.06
SMC4-212ENST00000470240 EFR3BQ9Y2G0 817 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 LRRC37A2A6NM11 1700 aa8.42□□□□□ -1.06
SMC4-212ENST00000470240 COL1A2P08123 1366 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 PTPRJQ12913 1337 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 CDC14CA4D256 554 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 SGK1O00141 431 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 DNALI1O14645 258 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 LIASO43766 372 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 RNF8O76064 485 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 SUN1O94901 812 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 GSTA1P08263 222 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 VSIG8P0DPA2 414 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 MCF2P10911 925 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 RHOQP17081 205 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 BRD2P25440 801 aaKnown RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 STX2P32856 288 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 CDH5P33151 784 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 SLCO1A2P46721 670 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 VPS41P49754 854 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 IL9RQ01113 521 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 PLCB3Q01970 1234 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 POU5F1BQ06416 359 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 KLF1Q13351 362 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 AUHQ13825 339 aaKnown RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 MORF4L2Q15014 288 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 STILQ15468 1287 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 TRIP13Q15645 432 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 LY6KQ17RY6 165 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 P3H1Q32P28 736 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 MAP7D1Q3KQU3 841 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 ZBTB41Q5SVQ8 909 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 TREML2Q5T2D2 321 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 KAZNQ674X7 775 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 RHBDF2Q6PJF5 856 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 SCARA5Q6ZMJ2 495 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 SPOCD1Q6ZMY3 1216 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 EEPD1Q7L9B9 569 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 CCDC13Q8IYE1 715 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 THNSL1Q8IYQ7 743 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 UBR7Q8N806 425 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 GBP7Q8N8V2 638 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 UHMK1Q8TAS1 419 aaKnown RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 FNIP1Q8TF40 1166 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 ZNF526Q8TF50 670 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 ATXN2LQ8WWM7 1075 aaKnown RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 ATG4AQ8WYN0 398 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 RBM15Q96T37 977 aaKnown RBP eCLIP8.41□□□□□ -1.065e-67■■■■■ 212.6
SMC4-212ENST00000470240 PCYT2Q99447 389 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 NCAPGQ9BPX3 1015 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 NFKBIZQ9BYH8 718 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
SMC4-212ENST00000470240 EPB41L4BQ9H329 900 aa8.41□□□□□ -1.06
SMC4-212ENST00000470240 ELP3Q9H9T3 547 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms