RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 TRNP1Q6NT89 227 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 MAMDC4Q6UXC1 1216 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 UNC45BQ8IWX7 931 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 FNIP1Q8TF40 1166 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 TGS1Q96RS0 853 aaKnown RBP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 NFKBIZQ9BYH8 718 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 FOXP3Q9BZS1 431 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 NSRP1Q9H0G5 558 aaKnown RBP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 MROH8Q9H579 483 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 AGAP1Q9UPQ3 857 aa15.42■□□□□ 0.06
CBWD3-205ENST00000469687 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
CBWD3-205ENST00000469687 KRT7P08729 469 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 OSBPP22059 807 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 FOXN2P32314 431 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 STX2P32856 288 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 WDR4P57081 412 aaKnown RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 MYO1EQ12965 1108 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 MMRN1Q13201 1228 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 EFTUD2Q15029 972 aaKnown RBP eCLIP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 PKN2Q16513 984 aaKnown RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 HADHQ16836 314 aaKnown RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 FNBP1LQ5T0N5 605 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 FAM102AQ5T9C2 384 aaPredicted RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 CGB2Q6NT52 195 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 TAPT1Q6NXT6 567 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 BBS12Q6ZW61 710 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 TRABD2AQ86V40 505 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 LINC01465Q8N7H1 131 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 AFG1LQ8WV93 481 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 CPT1BQ92523 772 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 HEXIM2Q96MH2 286 aaKnown RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 WDR83Q9BRX9 315 aaKnown RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 PLXNB2O15031 1838 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 ALOX15BO15296 676 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 GRAP2O75791 330 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 MCF2P10911 925 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 GHRP10912 638 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 GPX6P59796 221 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 TAZQ16635 292 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 FAM187BQ17R55 369 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 C12orf29Q8N999 325 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 KCTD6Q8NC69 237 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 USP18Q9UMW8 372 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 SHOC2Q9UQ13 582 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
CBWD3-205ENST00000469687 CLUHO75153 1309 aa15.41■□□□□ 0.06
CBWD3-205ENST00000469687 DNAH12Q6ZR08 3092 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 SSTR1P30872 391 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 RPL22P35268 128 aaKnown RBP15.4■□□□□ 0.06
CBWD3-205ENST00000469687 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 NDST1P52848 882 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 GSCP56915 257 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-205ENST00000469687 ZNF268Q14587 947 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-205ENST00000469687 C15orf59Q2T9L4 293 aaPredicted RBP15.4■□□□□ 0.06
CBWD3-205ENST00000469687 ZNF484Q5JVG2 852 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 NPNTQ6UXI9 565 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 RFX6Q8HWS3 928 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 FUKQ8N0W3 1084 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 C4orf33Q8N1A6 199 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 P3H4Q92791 437 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
CBWD3-205ENST00000469687 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 KLC4Q9NSK0 619 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 SLC12A4Q9UP95 1085 aa15.4■□□□□ 0.06
CBWD3-205ENST00000469687 ASB14A6NK59 587 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TMEM63AO94886 807 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TRUB2O95900 331 aaKnown RBP15.39■□□□□ 0.05
CBWD3-205ENST00000469687 GABRB2P47870 512 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TMEM132DQ14C87 1099 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 HIF1AQ16665 826 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 CDO1Q16878 200 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 SYCP2LQ5T4T6 812 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 CENPUQ71F23 418 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 NAT8LQ8N9F0 302 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 FAM71DQ8N9W8 422 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 PPP1R13LQ8WUF5 828 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 NLRP7Q8WX94 980 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 NKIRAS1Q9NYS0 192 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 GRID1Q9ULK0 1009 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 A0A1W2PPM1 405 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 E5RJQ4 531 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 UBOX5O94941 541 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TAC1P20366 129 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 CYP4V2Q6ZWL3 525 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-205ENST00000469687 FASTKD5Q7L8L6 764 aaKnown RBP15.39■□□□□ 0.05
CBWD3-205ENST00000469687 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
CBWD3-205ENST00000469687 CMASQ8NFW8 434 aaPredicted RBP15.39■□□□□ 0.05
CBWD3-205ENST00000469687 RSAD2Q8WXG1 361 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 MAGEB18Q96M61 343 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms