RNA–Protein interactions for RNA: ENST00000469361.5

TRAPPC6B-203, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 4,533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-203ENST00000469361 TSR3Q9UJK0 312 aaKnown RBP8.68□□□□□ -1.02
TRAPPC6B-203ENST00000469361 GTPBP10A4D1E9 387 aaKnown RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 EXTL3O43909 919 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SLITRK3O94933 977 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 VHLP40337 213 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 MARCKSL1P49006 195 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TNFAIP2Q03169 654 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 NSUN2Q08J23 767 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 DYNC1I2Q13409 638 aaKnown RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 EFTUD2Q15029 972 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TKFCQ3LXA3 575 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 LRRC8EQ6NSJ5 796 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 IFNEQ86WN2 208 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SCN4BQ8IWT1 228 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 BBS5Q8N3I7 341 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 HAS1Q92839 578 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 DNAJC19Q96DA6 116 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ING2Q9H160 280 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 NFIBO00712 420 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 WDR46O15213 610 aaKnown RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 FSBPO95073 299 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 CBX6O95503 412 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SSTR1P30872 391 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SHMT1P34896 483 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 GCLCP48506 637 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ALDH5A1P51649 535 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 COL24A1Q17RW2 1714 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 STYK1Q6J9G0 422 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ZSWIM2Q8NEG5 633 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 BEST2Q8NFU1 509 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 USP33Q8TEY7 942 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PDCD6IPQ8WUM4 868 aaKnown RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 OLFM3Q96PB7 478 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 INPP4AQ96PE3 977 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PAFAH2Q99487 392 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 IKZF4Q9H2S9 585 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 WDR35Q9P2L0 1181 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 KLRG2A4D1S0 409 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 FAM163BP0C2L3 166 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 AP3M2P53677 418 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 MOXD1Q6UVY6 613 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 OTUD5Q96G74 571 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 MED15Q96RN5 788 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 CCDC90BQ9GZT6 254 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 RXFP1Q9HBX9 757 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PAK5Q9P286 719 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 COL4A1P02462 1669 aa8.67□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SUPT3HO75486 399 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PROSCO94903 275 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 DALRD3Q5D0E6 543 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 IQCKQ8N0W5 287 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 FAM151AQ8WW52 585 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 EME1Q96AY2 570 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 DNAJC18Q9H819 358 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SARS2Q9NP81 518 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ZNF711Q9Y462 761 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 S100BP04271 92 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 FESP07332 822 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TXNP10599 105 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PAMP19021 973 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 FLT3P36888 993 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 DLG4P78352 724 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TMEM62Q0P6H9 643 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 BMPR2Q13873 1038 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 Q4G0T1 1027 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TFDP3Q5H9I0 405 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ZBTB41Q5SVQ8 909 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 IL31Q6EBC2 164 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 LAYNQ6UX15 382 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 NOP9Q86U38 636 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ZNF677Q86XU0 584 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SGF29Q96ES7 293 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ANKEF1Q9NU02 776 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 GPATCH2LQ9NWQ4 482 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SALL4Q9UJQ4 1053 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 CHEK2O96017 543 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 BGNP21810 368 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 EPHB2P29323 1055 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PKN2Q16513 984 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TTC8Q8TAM2 541 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PGM2Q96G03 612 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PWWP2AQ96N64 755 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 EPAS1Q99814 870 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 GCOM2Q9BZD3 368 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 TASP1Q9H6P5 420 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 C10orf88Q9H8K7 445 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 MAST2Q6P0Q8 1798 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ARHGAP10A1A4S6 786 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 KIAA0391O15091 583 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 CSDE1O75534 798 aaKnown RBP8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 ZSCAN5DPP0CG00 497 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 SLC12A3P55017 1021 aa8.66□□□□□ -1.02
TRAPPC6B-203ENST00000469361 PPP3CAQ08209 521 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms