RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 GBP2P32456 591 aaPredicted RBP9.08□□□□□ -0.96
SSBP1-208ENST00000469123 ZSCAN23Q3MJ62 389 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 FILIP1LQ4L180 1135 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 MIIPQ5JXC2 388 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 DENND5BQ6ZUT9 1274 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 GET4Q7L5D6 327 aaPredicted RBP9.08□□□□□ -0.96
SSBP1-208ENST00000469123 ACOT1Q86TX2 421 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 FMNL3Q8IVF7 1028 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 SCN4BQ8IWT1 228 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 UBALD2Q8IYN6 164 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 TTC9BQ8N6N2 239 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 FGF13Q92913 245 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 TATDN2Q93075 761 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
SSBP1-208ENST00000469123 MED10Q9BTT4 135 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 TTLL2Q9BWV7 592 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 DPEP3Q9H4B8 488 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 FBXO44Q9H4M3 255 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 CSNK1G1Q9HCP0 422 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 PLCB1Q9NQ66 1216 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 FANCLQ9NW38 375 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 APEX2Q9UBZ4 518 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 LIMA1Q9UHB6 759 aaKnown RBP9.08□□□□□ -0.96
SSBP1-208ENST00000469123 CNTN6Q9UQ52 1028 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 UNC80Q8N2C7 3258 aa9.08□□□□□ -0.96
SSBP1-208ENST00000469123 NUP210Q8TEM1 1887 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-208ENST00000469123 SLC38A8A6NNN8 435 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 LGALS16A8MUM7 142 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 C2CD4DB7Z1M9 353 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 F8VP50 259 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 PES1O00541 588 aaKnown RBP9.07□□□□□ -0.96
SSBP1-208ENST00000469123 MED7O43513 233 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 ATP2C2O75185 946 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 AP1G2O75843 785 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NPR3P17342 541 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 PON1P27169 355 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 BCAT1P54687 386 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 RAD23BP54727 409 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 BPIFB4P59827 614 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 MTMR3Q13615 1198 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NCAPHQ15003 741 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 KRT31Q15323 416 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NFKBIBQ15653 356 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 TMEM270Q6UE05 265 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 TMC8Q8IU68 726 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 FUKQ8N0W3 1084 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NUP93Q8N1F7 819 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 AOPEPQ8N6M6 819 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 UBR7Q8N806 425 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 KIAA1958Q8N8K9 716 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 SLC4A11Q8NBS3 891 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 SLC2A14Q8TDB8 520 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 WHAMMQ8TF30 809 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 MRPS31Q92665 395 aaKnown RBP9.07□□□□□ -0.96
SSBP1-208ENST00000469123 CYFIP2Q96F07 1278 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 SLITRK1Q96PX8 696 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 ARID3AQ99856 593 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 LPIN3Q9BQK8 851 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 B3GNT5Q9BYG0 378 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 TRPV4Q9HBA0 871 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 UBE2TQ9NPD8 197 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-208ENST00000469123 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 OBP2AQ9NY56 170 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 HESX1Q9UBX0 185 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 HMGXB4Q9UGU5 601 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 NME7Q9Y5B8 376 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 PCDHB4Q9Y5E5 795 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 PATJQ8NI35 1801 aa9.07□□□□□ -0.96
SSBP1-208ENST00000469123 BDP1A6H8Y1 2624 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 XIRP2A4UGR9 3374 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 ANAPC1Q9H1A4 1944 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 ANHXE9PGG2 379 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 GOLGA6L19H0YKK7 550 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 DCXO43602 365 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 HCRTO43612 131 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 ECI2O75521 394 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 SETSIPP0DME0 302 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 MYL4P12829 197 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 HMGA1P17096 107 aaKnown RBP9.06□□□□□ -0.96
SSBP1-208ENST00000469123 YWHAQP27348 245 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 GABRR2P28476 465 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 HOXD11P31277 338 aaPredicted RBP9.06□□□□□ -0.96
SSBP1-208ENST00000469123 TUBP50607 506 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 COPB1P53618 953 aaKnown RBP9.06□□□□□ -0.96
SSBP1-208ENST00000469123 BST2Q10589 180 aaKnown RBP9.06□□□□□ -0.96
SSBP1-208ENST00000469123 LRMPQ12912 555 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 DDR2Q16832 855 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 SLC5A9Q2M3M2 681 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 PHLDB3Q6NSJ2 640 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 LCLAT1Q6UWP7 414 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 TADA2BQ86TJ2 420 aa9.06□□□□□ -0.96
SSBP1-208ENST00000469123 RNF135Q8IUD6 432 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms