RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RASGRP4Q8TDF6 673 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 UCMAQ8WVF2 138 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GIMAP1Q8WWP7 306 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ATL1Q8WXF7 558 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 APPBP2Q92624 585 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 RPGRQ92834 1020 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PMEPA1Q969W9 287 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SLC7A6OSQ96CW6 309 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ERP27Q96DN0 273 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 NSL1Q96IY1 281 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 EPSTI1Q96J88 318 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF512BQ96KM6 892 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 NSMCE3Q96MG7 304 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PRICKLE1Q96MT3 831 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PRPF18Q99633 342 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 NOC4LQ9BVI4 516 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 NUF2Q9BZD4 464 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 OSBPL6Q9BZF3 934 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CRNKL1Q9BZJ0 848 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZCWPW1Q9H0M4 648 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GBA3Q9H227 469 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 C1orf21Q9H246 121 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 BOLA2Q9H3K6 86 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF696Q9H7X3 374 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CAAP1Q9H8G2 361 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 COPRSQ9NQ92 184 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PICK1Q9NRD5 415 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 VPS45Q9NRW7 570 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ETNK2Q9NVF9 386 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 FKBP14Q9NWM8 211 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 HOXC10Q9NYD6 342 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 C6orf203Q9P0P8 240 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 PHRF1Q9P1Y6 1649 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CEP72Q9P209 647 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 SFMBT1Q9UHJ3 866 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 LGALS13Q9UHV8 139 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GGT7Q9UJ14 662 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZFP69BQ9UJL9 534 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 GTF3C4Q9UKN8 822 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 CCPG1Q9ULG6 757 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 ZMYND8Q9ULU4 1186 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 RAB26Q9ULW5 256 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 RABL2BQ9UNT1 228 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 EXOC7Q9UPT5 735 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 TRAF3IP3Q9Y228 551 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MTO1Q9Y2Z2 717 aaKnown RBP5.1□□□□□ -1.59
SF3B1-207ENST00000468925 IKBKGQ9Y6K9 419 aa5.1□□□□□ -1.59
SF3B1-207ENST00000468925 MYO5BQ9ULV0 1848 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RGPD1P0DJD0 1748 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 METP08581 1390 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ESYT3A0FGR9 886 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 H0YJX3 145 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 GOLGA8MH3BSY2 632 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 LAD1O00515 517 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KPNA4O00629 521 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KCNK3O14649 394 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF213O14771 459 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 PFDN6O15212 129 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ALOX15BO15296 676 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RNF113AO15541 343 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 PRPF4O43172 522 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ZBTB43O43298 467 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 PALMO75781 387 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 FARP2O94887 1054 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 IL1BP01584 269 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RPN1P04843 607 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 F13BP05160 661 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 C8BP07358 591 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ESRRAP11474 423 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 FOSL1P15407 271 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 RAB6AP20340 208 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CDH3P22223 829 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TKTP29401 623 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 GTF2H1P32780 548 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 SERPINB6P35237 376 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 EIF4A3P38919 411 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MASP1P48740 699 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CDK9P50750 372 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 BCAP31P51572 246 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ARFIP2P53365 341 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 STX17P56962 302 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 BASP1P80723 227 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 DR1Q01658 176 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TEFQ10587 303 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 STK4Q13043 487 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 AUHQ13825 339 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 PTK2BQ14289 1009 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 STAT4Q14765 748 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 MAN2A1Q16706 1144 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KYNUQ16719 465 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 HSP90AA4PQ58FG1 418 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KIAA1755Q5JYT7 1200 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 SNRNP48Q6IEG0 339 aaKnown RBP5.09□□□□□ -1.59
SF3B1-207ENST00000468925 SULT6B1Q6IMI4 303 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 CNNM4Q6P4Q7 775 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF449Q6P9G9 518 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 TUBA3EQ6PEY2 450 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KLHL35Q6PF15 583 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 SLC2A7Q6PXP3 512 aa5.09□□□□□ -1.59
SF3B1-207ENST00000468925 KSR2Q6VAB6 950 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms