RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 L1TD1Q5T7N2 865 aaKnown RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 PMS2CLQ68D20 193 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 USP49Q70CQ1 688 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 RASSF3Q86WH2 238 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SPATA2LQ8IUW3 424 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 TOP6BLQ8N6T0 577 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 TSTD1Q8NFU3 115 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SPATA18Q8TC71 538 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 EPSTI1Q96J88 318 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 TPSD1Q9BZJ3 242 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 MRPL44Q9H9J2 332 aaKnown RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SEL1LQ9UBV2 794 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SIX4Q9UIU6 781 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 RALYQ9UKM9 306 aaKnown RBP14.03□□□□□ -0.16
PTPN7-207ENST00000468385 ITGA11Q9UKX5 1188 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 ARHGAP26Q9UNA1 814 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 EXOC7Q9UPT5 735 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 INVSQ9Y283 1065 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 SNX9Q9Y5X1 595 aa14.03□□□□□ -0.16
PTPN7-207ENST00000468385 FRYQ5TBA9 3013 aa14.02□□□□□ -0.16
PTPN7-207ENST00000468385 MYMKA6NI61 221 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 K7EQS6 105 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 TULP1O00294 542 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-207ENST00000468385 GBP1P32455 592 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 OPRD1P41143 372 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 LHX1P48742 406 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 NR1H3Q13133 447 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 SOWAHAQ2M3V2 549 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 GAB4Q2WGN9 574 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 FAM171BQ6P995 826 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 SCN4BQ8IWT1 228 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 ADGRF2Q8IZF7 708 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 FSIP1Q8NA03 581 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 USP33Q8TEY7 942 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 CACTINQ8WUQ7 758 aaKnown RBP14.02□□□□□ -0.17
PTPN7-207ENST00000468385 DNAJC19Q96DA6 116 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 ACCSQ96QU6 501 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 WASF3Q9UPY6 502 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.17
PTPN7-207ENST00000468385 GOLGA8IPA6NC78 632 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 GOLGA8JA6NMD2 632 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 C1QTNF9BB2RNN3 333 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 ATP2C2O75185 946 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 GCNT3O95395 438 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 NFATC1O95644 943 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 LDHAP00338 332 aaKnown RBP14.01□□□□□ -0.17
PTPN7-207ENST00000468385 KRT19P08727 400 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 C1QTNF9P0C862 333 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 HDCP19113 662 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 BCKDHBP21953 392 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 GARTP22102 1010 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 PCSK1P29120 753 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 MAGEA11P43364 429 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 CASP5P51878 434 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 SEC13P55735 322 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 RBP5P82980 135 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 KCNB1Q14721 858 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 USP39Q53GS9 565 aaKnown RBP14.01□□□□□ -0.17
PTPN7-207ENST00000468385 C2orf27AQ580R0 203 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 DAB2IPQ5VWQ8 1189 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
PTPN7-207ENST00000468385 LIMS2Q7Z4I7 341 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 BRAPQ7Z569 592 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 C11orf74Q86VG3 221 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 CCDC26Q8TAB7 109 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
PTPN7-207ENST00000468385 CBWD1Q9BRT8 395 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 FGFBP2Q9BYJ0 223 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 PDE11AQ9HCR9 933 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 STK17AQ9UEE5 414 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 SMC3Q9UQE7 1217 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 WDFY3Q8IZQ1 3526 aa14.01□□□□□ -0.17
PTPN7-207ENST00000468385 PATE3B3GLJ2 98 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 LEFTY2O00292 366 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 CDX4O14627 284 aaPredicted RBP14□□□□□ -0.17
PTPN7-207ENST00000468385 KHNYNO15037 678 aaKnown RBP14□□□□□ -0.17
PTPN7-207ENST00000468385 GAP43P17677 238 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 LMO2P25791 158 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 USP46P62068 366 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 PSMC1P62191 440 aaKnown RBP14□□□□□ -0.17
PTPN7-207ENST00000468385 ZNF252P-AS1Q0IIN9 211 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 SH3PXD2AQ5TCZ1 1133 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 LMBRD2Q68DH5 695 aaPredicted RBP14□□□□□ -0.17
PTPN7-207ENST00000468385 ANO7Q6IWH7 933 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 UNQ6494/PRO21346Q6UXR6 183 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 C4orf50Q6ZRC1 276 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 DPH6Q7L8W6 267 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 MDGA1Q8NFP4 955 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 MYLPFQ96A32 169 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 SPATA17Q96L03 361 aa14□□□□□ -0.17
PTPN7-207ENST00000468385 SYT15Q9BQS2 421 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms