RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 BEST1O76090 585 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 CYP11A1P05108 521 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 BRCC3P46736 316 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 RASGEF1CQ8N431 466 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 OR6B3Q8NGW1 331 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 CAPZA3Q96KX2 299 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 PPP1R12CQ9BZL4 782 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM59LQ9UK28 342 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 TIMM13Q9Y5L4 95 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-208ENST00000468300 KIAA1671Q9BY89 1806 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 A8MXQ7 604 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 M0QYV0 167 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 EFEMP2O95967 443 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 TCF4P15884 667 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 ACAT1P24752 427 aaKnown RBP8.73□□□□□ -1.01
BRCA1-208ENST00000468300 IFI16Q16666 785 aaKnown RBP8.73□□□□□ -1.01
BRCA1-208ENST00000468300 ERCC6LQ2NKX8 1250 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 GOLGA7BQ2TAP0 167 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 PAN2Q504Q3 1202 aaKnown RBP8.73□□□□□ -1.01
BRCA1-208ENST00000468300 CCDC70Q6NSX1 233 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 AADACL2Q6P093 401 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.73□□□□□ -1.012e-8■■■■■ 27.8
BRCA1-208ENST00000468300 FUKQ8N0W3 1084 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 MCRS1Q96EZ8 462 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 G3BP2Q9UN86 482 aaKnown RBP8.73□□□□□ -1.01
BRCA1-208ENST00000468300 COMMD10Q9Y6G5 202 aa8.73□□□□□ -1.01
BRCA1-208ENST00000468300 EFCAB8A8MWE9 144 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 GTF2A1P52655 376 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CACNA2D1P54289 1103 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 PSMC1P62191 440 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 MESDQ14696 234 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 NOMO2Q5JPE7 1267 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 PEX26Q7Z412 305 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ANKS1BQ7Z6G8 1248 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ZDHHC14Q8IZN3 488 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 SYCE1Q8N0S2 351 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 B3GALNT2Q8NCR0 500 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 C3orf20Q8ND61 904 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 JOSD2Q8TAC2 188 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 HASPINQ8TF76 798 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 RSPH1Q8WYR4 309 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 APBB2Q92870 758 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 C11orf49Q9H6J7 331 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 HUS1O60921 280 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 COQ9O75208 318 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TCP1P17987 556 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 IBSPP21815 317 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CTNNA2P26232 953 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CTNNA1P35221 906 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM110Q86TL2 294 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ERICH1Q86X53 443 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 FEZF2Q8TBJ5 459 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 SREK1Q8WXA9 508 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 UROC1Q96N76 676 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM209Q96SK2 561 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 NCAPGQ9BPX3 1015 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ANKZF1Q9H8Y5 726 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ANAPC7Q9UJX3 599 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 DCDC2CA8MYV0 355 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TMEM189-UBE2V1I3L0A0 370 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CLDN5O00501 218 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CALB1P05937 261 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 CDR1P51861 262 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TAS2R40P59535 323 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 RPS6KA1Q15418 735 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 DCLRE1AQ6PJP8 1040 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 OLFML1Q6UWY5 402 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 LRRTM3Q86VH5 581 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 OR10T2Q8NGX3 314 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 SLC2A14Q8TDB8 520 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ANKRD7Q92527 254 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 SEPT8Q92599 483 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 SUSD3Q96L08 255 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 HNRNPABQ99729 332 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 B3GNT5Q9BYG0 378 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 NRDE2Q9H7Z3 1164 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 TMLHEQ9NVH6 421 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 MARCH5Q9NX47 278 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 DDX43Q9NXZ2 648 aaKnown RBP8.72□□□□□ -1.01
BRCA1-208ENST00000468300 AMFRQ9UKV5 643 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 ATP11BQ9Y2G3 1177 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 PCDHA3Q9Y5H8 950 aa8.72□□□□□ -1.01
BRCA1-208ENST00000468300 MYBPHLA2RUH7 354 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 SIGLEC16A6NMB1 481 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 E5RJQ4 531 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 B3GAT3O94766 335 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 PROSCO94903 275 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 CLTBP09497 229 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 RFC1P35251 1148 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 CTCFP49711 727 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-208ENST00000468300 DNA2P51530 1060 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 ELF2Q15723 593 aa8.71□□□□□ -1.01
BRCA1-208ENST00000468300 RAB6CQ53S08 254 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms